Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.4e-60 236.1 120 100.0
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 3.0e-55 218.4 137 84.7
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.5e-51 206.1 120 86.7
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.5e-49 198.7 116 83.6
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.4e-47 193.0 116 82.8
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 5.1e-47 191.0 116 81.9
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 5.1e-47 191.0 116 81.9
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 1.8e-44 182.6 115 75.7
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.6e-43 178.7 118 72.0
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.9e-42 175.3 118 72.0
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 6.5e-42 174.1 118 72.0
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 9.4e-41 170.2 119 72.3
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.6e-40 169.5 118 67.8
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 3.9e-39 164.9 117 69.2
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 6.7e-39 164.1 118 66.9
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 6.7e-39 164.1 118 66.9
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.5e-38 162.9 118 66.1
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.0e-38 162.5 118 66.1
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 2.6e-38 162.2 115 68.7
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.3e-38 161.8 115 71.3
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 4.4e-38 161.4 118 69.5
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 5.7e-38 161.0 119 68.9
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 5.7e-38 161.0 119 67.2
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 7.4e-38 160.6 118 66.1
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.7e-37 159.5 117 65.8
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.7e-37 159.5 117 67.5
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.8e-37 158.7 117 66.7
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 4.8e-37 157.9 110 68.2
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 6.3e-37 157.5 115 68.7
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 6.3e-37 157.5 118 64.4
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.1e-36 156.8 115 67.8
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.1e-36 156.8 117 66.7
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.4e-36 156.4 117 64.1
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-36 155.6 115 67.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-36 155.6 115 67.0
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 5.3e-36 154.5 119 65.5
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 5.3e-36 154.5 115 67.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 9.1e-36 153.7 112 67.9
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 9.1e-36 153.7 119 63.9
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 1.2e-35 153.3 114 63.2
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-35 153.3 115 67.0
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-35 153.3 115 67.0
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.2e-35 153.3 117 64.1
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.5e-35 152.9 120 65.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.5e-35 152.9 117 65.8
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.5e-35 152.9 118 61.9
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 2.0e-35 152.5 114 66.7
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 3.5e-35 151.8 119 63.0
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 3.5e-35 151.8 115 65.2
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 4.5e-35 151.4 120 64.2
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 5.9e-35 151.0 119 63.0
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 5.9e-35 151.0 117 64.1
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 1.0e-34 150.2 119 65.5
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.7e-34 149.4 114 65.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.2e-34 149.1 125 63.2
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 3.8e-34 148.3 119 62.2
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 3.8e-34 148.3 117 60.7
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 8.5e-34 147.1 119 62.2
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 8.5e-34 147.1 117 59.0
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 3.2e-33 145.2 111 63.1
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.2e-33 144.8 114 64.0
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 4.2e-33 144.8 115 64.3
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 1.2e-32 143.3 117 57.3
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 1.6e-32 142.9 117 56.4
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 3.6e-32 141.7 116 58.6
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 4.7e-32 141.4 118 61.9
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 8.0e-32 140.6 110 61.8
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 8.0e-32 140.6 118 61.9
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 3.0e-31 138.7 157 49.7
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 3.9e-31 138.3 118 57.6
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 6.7e-31 137.5 110 60.0
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.6e-30 135.6 112 58.9
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 3.3e-30 135.2 110 59.1
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 3.3e-30 135.2 110 59.1
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 3.3e-30 135.2 110 59.1
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 3.3e-30 135.2 110 59.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.3e-30 135.2 114 58.8
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 5.7e-30 134.4 117 56.4
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.2e-29 132.5 123 52.8
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.8e-29 132.1 115 53.9
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.4e-28 129.8 110 58.2
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 2.4e-28 129.0 115 55.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 3.1e-28 128.6 118 55.1
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 4.1e-28 128.3 86 69.8
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.0e-27 125.9 110 57.3
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 2.0e-27 125.9 115 54.8
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.5e-27 125.2 94 66.0
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 3.5e-27 125.2 117 53.0
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 1.7e-26 122.9 147 47.6
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.9e-25 119.4 93 63.4
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.6e-24 116.3 119 50.4
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.7e-24 115.5 95 60.0
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.3e-23 112.5 91 60.4
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 4.0e-23 111.7 88 63.6
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 6.7e-23 110.9 116 51.7
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 3.3e-22 108.6 87 62.1
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.7e-22 107.1 83 61.4
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.3e-21 106.7 114 49.1
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.7e-21 105.1 82 61.0
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.8e-21 104.8 83 60.2
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.8e-21 104.8 83 60.2
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 6.3e-21 104.4 194 36.6
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 2.4e-20 102.4 83 60.2
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 5.3e-20 101.3 88 53.4
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 1.9e-17 92.8 110 48.2
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 3.2e-17 92.0 104 51.0
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.2e-14 83.6 77 49.4
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 2.3e-07 59.3 81 39.5


User provided reference genes

Program Settings