Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000306g0150 Nicotiana tabacum HOM05D000007 ORTHO05D014560 3.0e-142 508.4 245 100.0
CAN.G1324.2 Capsicum annuum HOM05D000007 ORTHO05D014560 5.7e-93 344.7 248 67.7
PGSC0003DMG400035548 Solanum tuberosum HOM05D000007 ORTHO05D014560 1.4e-86 323.6 248 64.9
Peaxi162Scf00047g00914 Petunia axillaris HOM05D000007 ORTHO05D014560 2.0e-85 319.7 245 65.3
Solyc09g091680.1 Solanum lycopersicum HOM05D000007 ORTHO05D014560 7.9e-79 297.7 249 60.2
Peaxi162Scf00047g00929 Petunia axillaris HOM05D000007 ORTHO05D014560 4.9e-44 182.2 239 44.4
Nitab4.5_0010402g0020 Nicotiana tabacum HOM05D000007 ORTHO05D014560 1.6e-42 177.2 255 40.4
PGSC0003DMG400040121 Solanum tuberosum HOM05D000691 ORTHO05D014560 4.7e-39 165.6 137 60.6
Nitab4.5_0000254g0190 Nicotiana tabacum HOM05D000007 ORTHO05D024765 3.3e-32 142.9 248 38.3
CAN.G500.54 Capsicum annuum HOM05D000007 ORTHO05D024765 6.2e-31 138.7 238 36.1
Sopen12g014540 Solanum pennellii HOM05D000007 ORTHO05D014560 4.4e-29 132.5 118 57.6
Nitab4.5_0000542g0020 Nicotiana tabacum HOM05D000007 ORTHO05D014560 6.4e-28 128.6 83 77.1
CAN.G500.57 Capsicum annuum HOM05D000007 ORTHO05D024765 6.6e-25 118.6 220 34.5
Nitab4.5_0000306g0160 Nicotiana tabacum HOM05D000007 ORTHO05D014560 1.9e-24 117.1 172 40.7
Nitab4.5_0002412g0030 Nicotiana tabacum HOM05D000007 ORTHO05D014560 1.7e-20 104.0 122 50.0
Nitab4.5_0000306g0130 Nicotiana tabacum HOM05D000007 ORTHO05D024765 1.3e-17 94.4 195 35.4
Nitab4.5_0000059g0510 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.9e-12 75.9 227 26.9
TWI34G0173 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 6.4e-12 75.5 208 26.0
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 8.4e-12 75.1 229 24.0
vmacro00299 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.2e-11 72.8 207 25.6
Nitab4.5_0000059g0530 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-10 70.9 223 26.0
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 3.5e-10 69.7 173 27.2
PGSC0003DMG400038051 Solanum tuberosum HOM05D000007 ORTHO05D014560 3.5e-10 69.7 43 72.1
Rhsim11G0019900 Rhododendron simsii HOM05D000007 ORTHO05D000017 4.6e-10 69.3 201 25.9
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.3e-09 67.0 173 26.6
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 2.3e-09 67.0 217 27.6
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 3.0e-09 66.6 231 23.4
ECA240G0379 Erigeron canadensis HOM05D000007 ORTHO05D000017 3.0e-09 66.6 179 27.9
FAN14G1591 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.0e-09 66.6 226 23.9
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 3.9e-09 66.2 177 27.7
TWI34G0359 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 5.1e-09 65.9 211 27.0
FvH4_6g40070 Fragaria vesca HOM05D000027 ORTHO05D000066 8.7e-09 65.1 216 24.1
CANSAT56G3489 Cannabis sativa HOM05D000007 ORTHO05D000017 1.1e-08 64.7 212 23.1
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.9e-08 63.9 240 24.2
PGSC0003DMG400045722 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-08 63.9 221 28.1
TWI34G1150 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 1.9e-08 63.9 214 25.7
AUR62012546 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.3e-08 63.2 201 24.4
DCAR_019955 Daucus carota HOM05D000007 ORTHO05D000017 4.3e-08 62.8 215 23.3
Prupe.1G567200 Prunus persica HOM05D000007 ORTHO05D000017 4.3e-08 62.8 201 24.4
PGSC0003DMG400039904 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.3e-08 62.8 220 26.4
Prupe.1G024400 Prunus persica HOM05D000007 ORTHO05D000017 5.6e-08 62.4 218 23.4
TWI63G0142 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 5.6e-08 62.4 225 24.4
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 7.3e-08 62.0 224 22.8
Lalb_Chr20g0118311 Lupinus albus HOM05D000007 ORTHO05D000017 7.3e-08 62.0 186 28.5
Nitab4.5_0005464g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.3e-08 62.0 227 23.8
Prupe.1G024800 Prunus persica HOM05D000007 ORTHO05D000017 9.6e-08 61.6 238 22.3
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 1.3e-07 61.2 157 25.5
Migut.N00548 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.6e-07 60.8 166 26.5
Lsat_1_v5_gn_4_143700 Lactuca sativa HOM05D000007 ORTHO05D000017 1.6e-07 60.8 223 28.3
MD02G1290400 Malus domestica HOM05D000007 ORTHO05D000017 1.6e-07 60.8 243 24.3
CSS0049080 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.1e-07 60.5 204 21.6
ECA246G4363 Erigeron canadensis HOM05D000007 ORTHO05D000017 2.1e-07 60.5 159 28.9
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.1e-07 60.5 227 22.5
Lalb_Chr11g0073821 Lupinus albus HOM05D000007 ORTHO05D000017 2.1e-07 60.5 194 24.2
Medtr5g011200 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-07 60.5 157 26.8
Aqoxy6G02474 Aquilegia oxysepala HOM05D000007 ORTHO05D026711 2.8e-07 60.1 182 29.1
PSO384G0684 Papaver somniferum HOM05D000007 ORTHO05D000017 2.8e-07 60.1 185 28.1
CSS0002420 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 3.6e-07 59.7 227 22.0
DCAR_019954 Daucus carota HOM05D000007 ORTHO05D000017 3.6e-07 59.7 220 20.9
Medtr2g029990 Medicago truncatula HOM05D000007 ORTHO05D000017 3.6e-07 59.7 163 27.6
AUR62012552 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.8e-07 59.3 224 24.1
Duzib192G0105 Durio zibethinus HOM05D000007 ORTHO05D000017 4.8e-07 59.3 226 23.0
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 4.8e-07 59.3 154 27.3
Sopen09g032160 Solanum pennellii HOM05D000007 ORTHO05D000017 4.8e-07 59.3 220 25.0
Dinv30807 Davidia involucrata HOM05D000007 ORTHO05D000017 6.2e-07 58.9 215 22.8
Gohir.D06G160400 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.2e-07 58.9 237 24.1
Phvul.007G113100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 6.2e-07 58.9 176 26.7
PGSC0003DMG400031292 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.2e-07 58.9 214 25.7
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 6.2e-07 58.9 154 27.9
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 8.1e-07 58.5 214 21.5
Cpa.g.sc75.108 Carica papaya HOM05D000007 ORTHO05D000017 8.1e-07 58.5 209 23.0
FvH4_7g25410 Fragaria vesca HOM05D000007 ORTHO05D000017 8.1e-07 58.5 225 24.4
FAN05G3133 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.1e-07 58.5 185 23.8
Lsat_1_v5_gn_6_61500 Lactuca sativa HOM05D000007 ORTHO05D000017 8.1e-07 58.5 186 27.4
Peaxi162Scf00698g00012 Petunia axillaris HOM05D000007 ORTHO05D000017 8.1e-07 58.5 201 23.4
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 8.1e-07 58.5 155 29.0
Psat4g035560 Pisum sativum HOM05D000007 ORTHO05D000017 8.1e-07 58.5 228 25.9
Rhsim13G0145100 Rhododendron simsii HOM05D000007 ORTHO05D000017 8.1e-07 58.5 229 23.6
RcHm_v2.0_Chr5g0030551 Rosa chinensis HOM05D000007 ORTHO05D000017 8.1e-07 58.5 235 23.0
Thecc.01G155200 Theobroma cacao HOM05D000007 ORTHO05D000039 8.1e-07 58.5 247 24.7
CAN.G500.20 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-06 58.2 220 26.8
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 1.1e-06 58.2 155 31.0
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 1.1e-06 58.2 212 22.6
PSO063G1871 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-06 58.2 235 25.1
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 1.1e-06 58.2 208 22.1
Aqoxy2G03513 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.4e-06 57.8 222 22.5
Ca_00599_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.4e-06 57.8 181 28.7
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-06 57.8 156 25.0
Nitab4.5_0000941g0210 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-06 57.8 150 25.3
QL02p063538 Quercus lobata HOM05D000007 ORTHO05D000017 1.4e-06 57.8 216 24.1
TWI32G0895 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-06 57.8 255 25.9
ECA247G2944 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.8e-06 57.4 221 25.8
Psat1g185120 Pisum sativum HOM05D000007 ORTHO05D000017 1.8e-06 57.4 182 29.7
RcHm_v2.0_Chr2g0154671 Rosa chinensis HOM05D000007 ORTHO05D000017 1.8e-06 57.4 204 25.5
Haze_06947 Corylus avellana HOM05D000007 ORTHO05D000017 2.4e-06 57.0 170 28.2
Dinv11914 Davidia involucrata HOM05D000007 ORTHO05D000017 2.4e-06 57.0 209 24.9
FvH4_6g40000 Fragaria vesca HOM05D000007 ORTHO05D000017 2.4e-06 57.0 178 26.4
Glyma.15G101600 Glycine max HOM05D000007 ORTHO05D000017 2.4e-06 57.0 154 27.3
MD02G1261500 Malus domestica HOM05D000007 ORTHO05D000017 2.4e-06 57.0 151 28.5
Medtr2g021150 Medicago truncatula HOM05D000007 ORTHO05D000017 2.4e-06 57.0 182 28.6
PSO170G2008 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-06 57.0 183 26.2
arahy.Tifrunner.gnm1.ann1.JPR8SG Arachis hypogaea HOM05D000007 ORTHO05D000039 3.1e-06 56.6 224 24.6
CAN.G3054.1 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-06 56.6 163 29.4
CAN.G500.25 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-06 56.6 163 29.4
CAN.G500.29 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-06 56.6 163 29.4
DCAR_019956 Daucus carota HOM05D000007 ORTHO05D000017 3.1e-06 56.6 234 25.6
Nitab4.5_0005464g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.1e-06 56.6 150 25.3
SGA_v2.0_scaffold90G27944 Striga asiatica HOM05D000007 ORTHO05D000039 3.1e-06 56.6 237 24.9
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 4.0e-06 56.2 226 23.0
COL.COLO4_31895 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.0e-06 56.2 239 23.4
ECA246G2645 Erigeron canadensis HOM05D000007 ORTHO05D000017 4.0e-06 56.2 236 26.7
FAN06G2196 Fragaria x ananassa HOM05D000007 ORTHO05D000399 4.0e-06 56.2 225 24.4
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 4.0e-06 56.2 236 23.7
PGSC0003DMG400031300 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.0e-06 56.2 225 24.9
Haze_25865 Corylus avellana HOM05D000007 ORTHO05D000017 5.3e-06 55.8 217 24.0
Medtr4g116320 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 55.8 234 25.2
CSS0002013 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 6.9e-06 55.5 115 35.7
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 6.9e-06 55.5 153 23.5
Sabra16G0002800 Salix brachista HOM05D000007 ORTHO05D000017 6.9e-06 55.5 242 23.6
Solyc09g083230.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 6.9e-06 55.5 220 24.1
Sopen09g032150 Solanum pennellii HOM05D000007 ORTHO05D000017 6.9e-06 55.5 220 24.1
PGSC0003DMG400006277 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.9e-06 55.5 152 27.0
PGSC0003DMG400041806 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.9e-06 55.5 156 28.2
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.0e-06 55.1 234 23.9
Migut.N00063 Erythranthe guttata HOM05D000007 ORTHO05D000017 9.0e-06 55.1 190 27.4
Lsat_1_v5_gn_4_143560 Lactuca sativa HOM05D000007 ORTHO05D000017 9.0e-06 55.1 226 26.1
Medtr6g086825 Medicago truncatula HOM05D000007 ORTHO05D000039 9.0e-06 55.1 239 23.4
Sabra16G0015300 Salix brachista HOM05D000007 ORTHO05D000017 9.0e-06 55.1 244 23.0
Solyc09g072930.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.0e-06 55.1 224 25.9
vmacro00292 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.0e-06 55.1 150 28.0


User provided reference genes

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