Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.7e-249 865.5 443 100.0
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.2e-223 779.6 443 89.6
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 8.9e-121 438.0 424 53.1
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 3.2e-118 429.5 422 50.9
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 9.2e-118 427.9 424 51.9
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 7.8e-117 424.9 422 52.1
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.3e-116 424.1 421 50.8
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.9e-116 422.5 403 53.3
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 8.6e-116 421.4 406 51.7
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 1.9e-115 420.2 405 52.1
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 3.3e-115 419.5 422 49.3
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 5.6e-115 418.7 407 51.1
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 9.5e-115 417.9 422 49.8
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 1.6e-114 417.2 422 49.3
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 1.6e-114 417.2 420 50.0
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.6e-114 417.2 422 49.8
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 4.7e-114 415.6 421 49.4
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.4e-113 414.1 405 51.6
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 4.0e-113 412.5 422 48.6
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 6.8e-113 411.8 407 52.1
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 6.8e-113 411.8 422 47.9
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 6.8e-113 411.8 458 46.7
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 3.4e-112 409.5 422 48.3
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 3.4e-112 409.5 422 49.8
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.8e-112 408.7 407 52.6
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.6e-112 408.3 405 51.1
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 7.6e-112 408.3 407 48.6
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 7.6e-112 408.3 421 48.9
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 7.6e-112 408.3 422 47.4
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 9.9e-112 407.9 462 46.1
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 2.9e-111 406.4 422 49.3
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 2.9e-111 406.4 419 49.6
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.9e-111 406.4 422 47.6
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 3.7e-111 406.0 405 49.6
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.9e-111 405.6 421 48.0
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 8.3e-111 404.8 423 48.0
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 1.9e-110 403.7 422 49.3
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 2.4e-110 403.3 422 47.6
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 2.1e-109 400.2 415 48.4
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 3.5e-109 399.4 422 48.1
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.0e-108 397.9 423 47.5
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 2.3e-108 396.7 421 47.7
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 3.9e-108 396.0 412 48.8
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 1.5e-107 394.0 457 46.4
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 2.5e-107 393.3 423 47.8
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 7.3e-107 391.7 438 45.9
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 1.2e-106 391.0 422 45.7
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 1.6e-106 390.6 422 45.7
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.1e-105 387.9 426 45.5
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.1e-105 387.9 422 46.4
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 1.8e-105 387.1 424 47.2
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 7.6e-104 381.7 388 49.7
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 2.2e-103 380.2 437 44.6
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 2.9e-103 379.8 368 52.4
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 6.4e-103 378.6 381 49.9
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.9e-102 377.1 406 48.5
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.9e-102 377.1 406 48.3
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.9e-102 377.1 484 41.9
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 1.6e-101 374.0 372 48.7
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 6.0e-101 372.1 405 45.7
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 6.6e-100 368.6 405 46.4
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 5.6e-99 365.5 412 44.7
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.2e-96 357.8 422 45.0
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 1.3e-95 354.4 422 45.0
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 1.7e-95 354.0 456 42.3
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 8.4e-95 351.7 423 44.9
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 1.4e-94 350.9 365 47.4
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.4e-94 350.1 421 43.0
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 2.1e-93 347.1 448 48.7
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 4.6e-93 345.9 419 45.3
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 2.3e-92 343.6 422 44.5
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 4.8e-90 335.9 379 45.9
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.4e-89 334.3 350 50.6
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 3.9e-84 316.2 341 49.0
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 2.1e-82 310.5 397 42.6
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.7e-82 309.7 370 43.8
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 6.9e-81 305.4 287 53.7
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.3e-79 301.2 406 41.4
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.9e-79 300.1 422 41.5
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 8.4e-79 298.5 277 53.1
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 8.4e-79 298.5 446 39.5
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.5e-75 287.0 292 51.0
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.6e-74 284.3 288 49.7
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 5.3e-73 279.3 412 38.8
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.0e-72 277.3 418 37.3
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 7.6e-72 275.4 418 37.8
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 3.8e-71 273.1 450 36.4
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 5.0e-71 272.7 279 48.7
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.4e-70 271.2 432 36.6
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 4.2e-70 269.6 424 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 3.9e-68 263.1 407 37.3
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 5.1e-68 262.7 425 35.5
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.6e-64 250.4 273 50.5
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 1.3e-63 248.1 381 37.3
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 9.4e-62 241.9 275 44.7
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 2.7e-61 240.4 554 31.9
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.4e-60 238.0 423 35.2
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.1e-60 236.1 193 65.8
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.8e-58 230.3 150 75.3
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.0e-55 221.9 213 52.1
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 1.7e-55 221.1 326 37.7
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 2.5e-54 217.2 383 33.7
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.2e-54 216.5 146 72.6
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.2e-54 216.5 134 79.9
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.5e-54 216.1 433 32.3
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 6.7e-52 209.1 233 45.1
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 1.5e-51 208.0 266 41.0
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.1e-49 199.9 346 34.7
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 1.2e-45 188.3 189 50.3
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.0e-44 183.7 194 49.0
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 1.1e-41 175.3 382 30.9
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 2.4e-41 174.1 380 30.8
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 9.1e-41 172.2 388 30.9
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 6.8e-36 156.0 328 32.6
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.3e-34 149.4 114 61.4
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.7e-29 133.3 327 29.7
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 3.0e-28 130.6 115 53.9
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.4e-27 127.1 179 39.7
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 4.4e-27 126.7 146 44.5
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 7.5e-27 125.9 193 36.8
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 1.8e-25 121.3 145 41.4
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.4e-25 119.8 410 27.1
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 8.6e-23 112.5 120 47.5
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.5e-19 101.7 148 38.5
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 9.8e-19 99.0 165 39.4
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 1.1e-17 95.5 94 47.9
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 1.8e-17 94.7 94 46.8
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 7.0e-17 92.8 235 31.1
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.0e-15 87.4 77 51.9
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.5e-14 84.3 256 25.8
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.8e-13 80.9 103 33.0
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 2.0e-11 74.7 69 46.4
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.2e-10 71.2 74 43.2
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 1.9e-09 68.2 70 45.7
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 1.2e-08 65.5 77 41.6


User provided reference genes

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