Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 3.2e-29 131.7 62 100.0
Nitab4.5_0004298g0050 Nicotiana tabacum HOM05D008359 ORTHO05D010300 5.7e-10 67.8 33 100.0
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 1.7e-09 66.2 34 91.2
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 3.7e-09 65.1 32 96.9
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 1.4e-08 63.2 34 88.2
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 1.4e-08 63.2 34 88.2
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 1.8e-08 62.8 33 87.9
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 1.8e-08 62.8 32 90.6
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 1.8e-08 62.8 32 90.6
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 3.1e-08 62.0 30 96.7
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 5.4e-08 61.2 32 87.5
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 7.0e-08 60.8 34 85.3
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 7.0e-08 60.8 32 87.5
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 9.2e-08 60.5 32 90.6
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 9.2e-08 60.5 32 90.6
FAN04G0049 Fragaria x ananassa HOM05D024256 ORTHO05D010300 9.2e-08 60.5 31 90.3
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 9.2e-08 60.5 32 90.6
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 1.2e-07 60.1 31 93.5
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 1.2e-07 60.1 30 93.3
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 1.6e-07 59.7 30 93.3
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 2.7e-07 58.9 32 84.4
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 2.7e-07 58.9 32 84.4
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 2.7e-07 58.9 32 84.4
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 2.7e-07 58.9 32 84.4
FAN11G0909 Fragaria x ananassa HOM05D008359 ORTHO05D010300 2.7e-07 58.9 33 84.8
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 3.5e-07 58.5 31 87.1
FvH4_4g20460 Fragaria vesca HOM05D008359 ORTHO05D010300 3.5e-07 58.5 29 93.1
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 4.5e-07 58.2 32 87.5
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 5.9e-07 57.8 29 93.1
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 5.9e-07 57.8 31 87.1
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 5.9e-07 57.8 32 84.4
THA.LOC104821801 Tarenaya hassleriana HOM05D008359 ORTHO05D010300 5.9e-07 57.8 30 93.3
Nn3g21784 Nelumbo nucifera HOM05D008359 ORTHO05D010300 7.7e-07 57.4 35 82.9
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 1.0e-06 57.0 30 86.7
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 1.3e-06 56.6 31 83.9
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 1.3e-06 56.6 28 92.9
Sopen08g001040 Solanum pennellii HOM05D028028 ORTHO05D010112 1.3e-06 56.6 36 77.8
Gohir.D01G023571 Gossypium hirsutum HOM05D028176 ORTHO05D010300 1.7e-06 56.2 29 89.7
HanXRQChr01g0022331 Helianthus annuus HOM05D008359 ORTHO05D010300 1.7e-06 56.2 32 81.2
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 2.3e-06 55.8 32 81.2
CSS0020578 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 2.9e-06 55.5 28 89.3
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 2.9e-06 55.5 30 83.3
QL06p012880 Quercus lobata HOM05D008359 ORTHO05D010300 3.8e-06 55.1 26 100.0
PGSC0003DMG400001152 Solanum tuberosum HOM05D028028 ORTHO05D010300 3.8e-06 55.1 26 100.0
THA.LOC104820317 Tarenaya hassleriana HOM05D008359 ORTHO05D010300 3.8e-06 55.1 26 100.0
CSS0040370 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 5.0e-06 54.7 30 80.0
DCAR_030453 Daucus carota HOM05D008359 ORTHO05D010300 5.0e-06 54.7 31 80.6
ECA246G4255 Erigeron canadensis HOM05D008359 ORTHO05D010300 5.0e-06 54.7 32 78.1
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 5.0e-06 54.7 29 86.2
TAR633G1589 Trochodendron aralioides HOM05D008359 ORTHO05D010300 5.0e-06 54.7 34 76.5
MBI19_g03271_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 6.6e-06 54.3 35 77.1
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 6.6e-06 54.3 31 80.6
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 6.6e-06 54.3 27 92.6
MSTRG.27929 Avicennia marina HOM05D008359 ORTHO05D010300 8.6e-06 53.9 32 81.2


User provided reference genes

Program Settings