Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.2e-31 136.7 65 100.0
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 2.5e-08 61.6 63 50.8
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 7.4e-08 60.1 59 55.9
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 9.7e-08 59.7 61 52.5
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 9.7e-08 59.7 61 52.5
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 1.6e-07 58.9 52 59.6
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 1.6e-07 58.9 52 59.6
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.2e-07 58.5 59 52.5
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 2.2e-07 58.5 59 54.2
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 2.2e-07 58.5 60 51.7
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 2.2e-07 58.5 65 49.2
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.2e-07 58.5 59 54.2
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.8e-07 58.2 63 47.6
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 2.8e-07 58.2 63 47.6
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.8e-07 58.2 28 96.4
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 2.8e-07 58.2 59 52.5
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 55.8
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.7e-07 57.8 59 52.5
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 3.7e-07 57.8 52 57.7
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 3.7e-07 57.8 54 53.7
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 4.8e-07 57.4 59 50.8
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.8e-07 57.4 59 52.5
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 4.8e-07 57.4 52 55.8
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 4.8e-07 57.4 59 52.5
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 4.8e-07 57.4 61 50.8
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 4.8e-07 57.4 59 52.5
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 6.3e-07 57.0 28 92.9
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 6.3e-07 57.0 52 55.8
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 6.3e-07 57.0 52 55.8
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 6.3e-07 57.0 63 46.0
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 6.3e-07 57.0 63 47.6
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 6.3e-07 57.0 59 50.8
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 6.3e-07 57.0 61 50.8
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 6.3e-07 57.0 28 92.9
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.3e-07 57.0 52 57.7
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 8.2e-07 56.6 28 89.3
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 8.2e-07 56.6 52 55.8
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 49.2
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 57.7
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 8.2e-07 56.6 61 50.8
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 8.2e-07 56.6 61 50.8
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 8.2e-07 56.6 59 50.8
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 8.2e-07 56.6 52 55.8
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.1e-06 56.2 59 49.2
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.1e-06 56.2 59 49.2
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 1.1e-06 56.2 59 50.8
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 1.1e-06 56.2 59 50.8
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 55.8
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 1.1e-06 56.2 52 53.8
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 1.1e-06 56.2 61 50.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 1.4e-06 55.8 53 52.8
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.4e-06 55.8 63 46.0
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.4e-06 55.8 52 55.8
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.4e-06 55.8 52 55.8
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 1.4e-06 55.8 61 49.2
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 1.4e-06 55.8 52 55.8
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.4e-06 55.8 52 53.8
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.4e-06 55.8 52 51.9
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.4e-06 55.8 29 82.8
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 1.4e-06 55.8 28 85.7
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 1.8e-06 55.5 52 53.8
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 1.8e-06 55.5 52 53.8
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.4e-06 55.1 59 49.2
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.4e-06 55.1 59 49.2
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.4e-06 55.1 59 49.2
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.4e-06 55.1 59 49.2
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 3.1e-06 54.7 61 49.2
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 53.8
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 53.8
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 55.8
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 55.8
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 3.1e-06 54.7 59 47.5
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 53.8
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 53.8
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 3.1e-06 54.7 52 53.8
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 4.1e-06 54.3 52 51.9
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 4.1e-06 54.3 52 53.8
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 4.1e-06 54.3 52 53.8
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 4.1e-06 54.3 52 51.9
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 4.1e-06 54.3 59 49.2
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 4.1e-06 54.3 59 49.2
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 4.1e-06 54.3 52 51.9
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 4.1e-06 54.3 63 47.6
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 5.3e-06 53.9 52 53.8
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 5.3e-06 53.9 52 53.8
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 5.3e-06 53.9 52 53.8
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 5.3e-06 53.9 52 53.8
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 6.9e-06 53.5 28 85.7
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 6.9e-06 53.5 29 82.8
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 6.9e-06 53.5 27 88.9
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 6.9e-06 53.5 28 85.7


User provided reference genes

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