Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 3.4e-70 268.5 163 100.0
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.3e-48 196.8 167 77.8
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 6.5e-45 184.5 140 72.9
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.4e-39 166.8 140 69.3
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 1.4e-39 166.8 140 69.3
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.5e-36 156.0 140 65.7
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 1.2e-35 153.7 140 66.4
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 2.0e-30 136.3 146 57.5
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 2.7e-30 136.0 143 57.3
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 3.5e-30 135.6 141 58.2
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.8e-29 132.1 143 55.2
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 3.8e-29 132.1 143 55.9
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 6.6e-29 131.3 143 55.2
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 8.6e-29 131.0 142 55.6
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.1e-28 130.6 142 52.8
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 1.1e-28 130.6 142 50.0
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.1e-28 130.6 145 53.8
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-28 130.2 141 54.6
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.3e-28 129.0 143 52.4
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 3.3e-28 129.0 141 56.7
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 4.2e-28 128.6 153 50.3
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 5.5e-28 128.3 142 54.2
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.1e-27 126.3 142 61.3
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 2.8e-27 125.9 142 52.8
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 3.6e-27 125.6 153 50.3
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 4.7e-27 125.2 141 48.2
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 4.7e-27 125.2 152 52.6
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 4.7e-27 125.2 141 53.2
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 6.1e-27 124.8 145 54.5
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.4e-26 123.6 142 50.0
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.4e-26 123.6 142 50.0
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.8e-26 123.2 142 51.4
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 2.3e-26 122.9 141 52.5
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.0e-26 122.5 148 52.0
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 3.0e-26 122.5 143 49.7
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.0e-26 122.1 147 51.7
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 4.0e-26 122.1 151 51.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 5.2e-26 121.7 152 46.7
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 5.2e-26 121.7 152 46.7
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 6.8e-26 121.3 145 51.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 6.8e-26 121.3 142 51.4
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 6.8e-26 121.3 143 51.0
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 8.9e-26 120.9 149 51.0
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.2e-25 120.6 142 50.7
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.5e-25 120.2 140 50.0
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.5e-25 120.2 149 48.3
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 1.5e-25 120.2 140 51.4
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.0e-25 119.8 152 50.0
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.0e-25 119.8 144 50.0
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.0e-25 119.8 141 53.2
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.6e-25 119.4 149 48.3
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.6e-25 119.4 142 50.0
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 4.4e-25 118.6 144 55.6
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.4e-25 118.6 141 50.4
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 5.7e-25 118.2 150 49.3
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 7.5e-25 117.9 140 53.6
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 9.8e-25 117.5 142 48.6
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.3e-24 117.1 143 49.0
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.7e-24 116.7 143 49.0
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.7e-24 116.7 143 53.1
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 2.2e-24 116.3 147 49.0
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.8e-24 115.9 151 45.0
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 3.7e-24 115.5 143 50.3
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 4.9e-24 115.2 144 52.8
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 4.9e-24 115.2 149 48.3
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 6.3e-24 114.8 149 49.0
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 8.3e-24 114.4 142 49.3
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.1e-23 114.0 143 49.0
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.8e-23 113.2 140 50.0
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.4e-23 112.8 141 50.4
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 7.0e-23 111.3 143 50.3
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.2e-22 110.5 140 56.4
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.2e-22 110.5 143 50.3
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 1.6e-22 110.2 143 49.7
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-22 110.2 143 50.3
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-22 110.2 143 49.7
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.6e-22 110.2 141 48.9
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 2.0e-22 109.8 146 47.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 3.5e-22 109.0 140 50.0
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 3.5e-22 109.0 143 46.2
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 4.5e-22 108.6 154 45.5
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 5.9e-22 108.2 142 45.8
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 5.9e-22 108.2 150 46.7
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 5.9e-22 108.2 149 47.0
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 7.8e-22 107.8 141 46.8
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.0e-21 107.5 144 49.3
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 1.0e-21 107.5 149 46.3
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 1.3e-21 107.1 139 46.0
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.7e-21 106.7 139 46.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.3e-21 106.3 150 46.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 3.9e-21 105.5 73 76.7
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 3.9e-21 105.5 139 47.5
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 5.0e-21 105.1 143 49.0
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 8.6e-21 104.4 146 46.6
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.1e-20 104.0 141 46.8
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.5e-20 103.6 142 45.1
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 1.5e-20 103.6 140 47.9
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.9e-20 103.2 145 44.1
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 3.3e-20 102.4 142 45.1
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 5.6e-20 101.7 154 42.2
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 7.3e-20 101.3 150 42.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.6e-19 100.1 139 43.9
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 2.1e-19 99.8 142 51.4
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 2.1e-19 99.8 139 43.9
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 2.1e-19 99.8 139 43.9
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 2.1e-19 99.8 139 43.9
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 2.1e-19 99.8 139 43.9
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 3.6e-19 99.0 139 44.6
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.7e-19 98.6 139 43.2
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 4.0e-18 95.5 139 41.7
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 5.2e-18 95.1 144 41.7
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.2e-17 94.0 143 42.7
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.7e-16 90.1 73 65.8
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 2.2e-16 89.7 145 41.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 2.9e-16 89.4 142 40.1
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 2.9e-16 89.4 146 40.4
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.9e-16 88.6 139 41.7
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 8.3e-16 87.8 139 42.4
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.9e-15 86.7 56 76.8
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 5.4e-15 85.1 143 40.6
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 4.6e-14 82.0 132 43.2
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 1.0e-13 80.9 125 44.8
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 3.0e-13 79.3 128 43.8
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.9e-13 79.0 52 75.0
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 3.3e-12 75.9 53 66.0
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.0e-11 71.2 60 53.3
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.6e-09 66.2 69 55.1


User provided reference genes

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