Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.7e-82 309.3 154 100.0
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.6e-72 276.2 154 92.2
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 5.9e-72 274.2 154 91.6
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 1.0e-71 273.5 154 90.9
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 2.2e-71 272.3 154 90.9
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 2.2e-71 272.3 154 90.9
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 2.2e-71 272.3 154 90.9
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 5.0e-71 271.2 153 90.2
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 6.5e-71 270.8 154 89.6
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 6.5e-71 270.8 154 89.6
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 8.5e-71 270.4 154 89.6
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 8.5e-71 270.4 154 89.0
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.1e-70 270.0 154 89.0
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 1.1e-70 270.0 154 89.0
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.5e-70 269.6 154 89.6
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 2.5e-70 268.9 154 89.0
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 4.2e-70 268.1 154 89.0
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 5.5e-70 267.7 154 88.3
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 7.2e-70 267.3 154 88.3
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 9.4e-70 266.9 154 87.7
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 9.4e-70 266.9 154 88.3
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 1.2e-69 266.5 154 88.3
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 1.6e-69 266.2 154 88.3
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 2.1e-69 265.8 154 87.0
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 2.1e-69 265.8 154 87.7
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.7e-69 265.4 152 88.2
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 2.7e-69 265.4 152 88.2
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 3.6e-69 265.0 154 87.7
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 4.7e-69 264.6 154 87.7
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 4.7e-69 264.6 154 87.0
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 4.7e-69 264.6 154 87.0
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 6.1e-69 264.2 152 86.2
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 6.1e-69 264.2 152 87.5
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 6.1e-69 264.2 153 87.6
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 8.0e-69 263.8 154 87.0
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 8.0e-69 263.8 167 80.8
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.0e-68 263.5 154 87.7
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 1.0e-68 263.5 154 86.4
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 1.0e-68 263.5 154 85.7
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 1.4e-68 263.1 154 87.0
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 1.4e-68 263.1 154 85.7
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 1.8e-68 262.7 154 85.1
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 2.3e-68 262.3 154 86.4
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 2.3e-68 262.3 154 86.4
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 2.3e-68 262.3 154 86.4
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 3.0e-68 261.9 154 86.4
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 3.0e-68 261.9 154 86.4
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 4.0e-68 261.5 154 86.4
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 5.2e-68 261.2 154 85.7
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 5.2e-68 261.2 154 85.7
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 5.2e-68 261.2 154 86.4
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 6.8e-68 260.8 152 86.2
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 8.8e-68 260.4 152 86.2
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 8.8e-68 260.4 152 86.2
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 8.8e-68 260.4 152 86.2
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 8.8e-68 260.4 152 86.2
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 8.8e-68 260.4 151 86.8
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.2e-67 260.0 154 83.8
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 1.2e-67 260.0 154 84.4
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 1.5e-67 259.6 154 85.7
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.0e-67 259.2 154 85.7
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 2.0e-67 259.2 154 83.8
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.0e-67 259.2 154 83.8
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 4.4e-67 258.1 154 83.1
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.5e-67 257.3 154 83.1
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 9.8e-67 256.9 151 85.4
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 1.7e-66 256.1 154 83.1
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 1.7e-66 256.1 154 83.8
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 3.7e-66 255.0 151 84.8
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 6.3e-66 254.2 152 84.2
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 1.4e-65 253.1 154 82.5
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 1.4e-65 253.1 152 83.6
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 1.8e-65 252.7 208 67.8
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 3.1e-65 251.9 180 73.9
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 4.1e-65 251.5 154 81.8
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 7.0e-65 250.8 148 83.1
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 9.1e-65 250.4 203 66.0
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 1.6e-64 249.6 148 83.1
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 4.5e-64 248.1 148 81.8
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 5.9e-64 247.7 150 82.7
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.0e-63 246.9 150 81.3
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 1.3e-63 246.5 150 82.0
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.3e-63 246.5 150 81.3
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.3e-63 246.5 150 81.3
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 2.9e-63 245.4 150 81.3
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 2.9e-63 245.4 147 83.0
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 3.8e-63 245.0 150 82.0
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 8.6e-63 243.8 150 81.3
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 8.6e-63 243.8 156 80.1
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.1e-62 243.4 153 81.0
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 1.5e-62 243.0 150 79.3
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 1.9e-62 242.7 152 80.3
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 4.2e-62 241.5 152 78.3
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 5.5e-62 241.1 151 79.5
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 7.2e-62 240.7 150 79.3
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.2e-61 240.0 140 85.7
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 2.8e-61 238.8 152 77.6
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 4.7e-61 238.0 150 78.7
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 4.7e-61 238.0 150 78.7
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 6.1e-61 237.7 150 80.0
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 6.1e-61 237.7 150 80.0
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 6.1e-61 237.7 150 80.0
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 6.1e-61 237.7 150 80.0
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 1.8e-60 236.1 150 77.3
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 1.8e-60 236.1 150 77.3
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 1.8e-60 236.1 150 79.3
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 6.8e-60 234.2 147 81.0
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 2.6e-59 232.3 178 69.1
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 2.6e-59 232.3 148 76.4
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 1.4e-57 226.5 152 77.0
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 3.2e-57 225.3 148 74.3
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 1.5e-54 216.5 150 74.0
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 2.5e-54 215.7 139 76.3
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 2.1e-53 212.6 154 65.6
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 1.4e-52 209.9 160 67.5
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 7.5e-51 204.1 152 63.8
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.3e-47 193.4 124 78.2
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 3.0e-47 192.2 132 72.7
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 6.6e-47 191.0 99 90.9
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 8.6e-47 190.7 146 61.0
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 7.3e-46 187.6 148 58.1
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 1.6e-45 186.4 97 92.8
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 4.0e-44 181.8 130 74.6
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 3.9e-39 165.2 128 71.1
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 2.4e-28 129.4 84 82.1
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 4.9e-26 121.7 157 43.3
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 8.4e-26 120.9 84 77.4
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 7.1e-25 117.9 84 75.0
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 7.1e-25 117.9 84 73.8
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 7.1e-25 117.9 140 49.3
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 5.4e-17 91.7 43 95.3
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 9.0e-12 74.3 164 31.1
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 9.9e-11 70.9 44 77.3
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 1.1e-09 67.4 127 34.6
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 2.4e-09 66.2 63 57.1
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 1.3e-07 60.5 35 74.3


User provided reference genes

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