Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.9e-197 690.3 353 100.0
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 5.3e-185 651.0 353 92.9
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 4.6e-152 541.6 353 76.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.7e-151 539.7 353 77.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 7.3e-150 534.3 354 78.5
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 3.9e-143 511.9 378 69.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 6.9e-124 448.0 261 79.3
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.0e-123 446.4 353 66.9
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 3.2e-121 439.1 300 71.3
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.3e-119 433.0 311 64.6
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 4.3e-118 428.7 253 76.3
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 9.6e-118 427.6 315 65.1
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 2.1e-117 426.4 310 66.5
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 3.6e-117 425.6 261 73.2
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 3.6e-117 425.6 262 74.8
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.6e-117 425.6 260 75.4
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.4e-116 422.9 309 66.7
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 3.1e-116 422.5 261 73.6
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 4.0e-116 422.2 262 75.2
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 4.0e-116 422.2 261 73.2
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 3.4e-115 419.1 261 74.3
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 3.4e-115 419.1 257 74.3
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 4.5e-115 418.7 264 75.4
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 5.8e-115 418.3 256 72.3
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 2.2e-114 416.4 256 74.6
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.2e-114 416.4 258 73.6
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 2.2e-114 416.4 262 71.8
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.2e-114 416.4 321 63.2
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 3.8e-114 415.6 257 72.8
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 4.9e-114 415.2 315 63.8
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.1e-113 414.1 253 73.1
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 1.1e-113 414.1 255 74.1
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.4e-113 412.9 258 72.1
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 3.2e-113 412.5 256 72.7
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.4e-113 411.8 258 71.7
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.4e-113 411.8 258 71.7
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 7.1e-113 411.4 275 69.1
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.2e-112 410.6 256 73.4
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.7e-112 409.5 257 71.2
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.5e-112 409.1 258 71.3
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 3.5e-112 409.1 261 70.1
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 6.0e-112 408.3 258 70.9
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 7.9e-112 407.9 328 59.8
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 1.3e-111 407.1 258 71.3
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.8e-111 406.8 261 70.1
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.0e-111 406.0 255 71.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.0e-111 406.0 258 70.9
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 3.9e-111 405.6 256 70.3
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 6.7e-111 404.8 371 55.0
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.9e-110 403.3 256 71.9
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 1.9e-110 403.3 259 70.3
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.9e-110 403.3 260 71.2
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 2.5e-110 402.9 256 69.1
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 4.3e-110 402.1 253 74.7
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 7.4e-110 401.4 311 62.7
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 9.6e-110 401.0 256 69.5
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.3e-109 400.6 256 70.7
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 2.1e-109 399.8 256 72.7
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.1e-108 397.5 256 69.1
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 3.1e-108 396.0 255 70.2
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 4.0e-108 395.6 255 69.0
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 4.0e-108 395.6 255 69.0
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 4.0e-108 395.6 255 69.0
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.0e-107 393.3 261 67.8
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 2.0e-107 393.3 256 71.5
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 7.6e-107 391.3 256 68.4
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 1.7e-106 390.2 256 68.0
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.2e-106 389.8 248 71.8
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 3.8e-106 389.0 263 66.2
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.4e-105 387.1 289 63.0
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 5.5e-105 385.2 225 77.3
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 2.7e-104 382.9 294 61.2
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 2.7e-104 382.9 248 68.5
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 6.0e-104 381.7 373 51.5
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.8e-103 380.2 248 67.3
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 5.1e-103 378.6 229 75.5
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 4.3e-102 375.6 252 66.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 7.4e-102 374.8 226 74.3
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 1.6e-101 373.6 223 76.7
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 4.8e-101 372.1 233 72.1
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.1e-100 370.9 258 66.7
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 1.9e-89 333.6 261 60.9
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 1.3e-87 327.4 315 51.1
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 3.7e-85 319.3 216 68.1
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 5.0e-82 308.9 255 59.6
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 2.5e-81 306.6 244 59.0
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 5.5e-81 305.4 228 62.3
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 6.7e-79 298.5 259 52.9
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 8.8e-79 298.1 182 73.1
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 5.7e-78 295.4 198 66.2
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 5.7e-78 295.4 189 69.8
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 7.4e-78 295.0 182 73.6
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.3e-77 294.3 231 59.7
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.3e-77 294.3 231 59.7
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 5.0e-74 282.3 255 56.5
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 3.2e-73 279.6 180 72.8
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 2.1e-72 276.9 164 76.2
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.3e-70 269.6 177 68.4
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.8e-69 265.8 238 51.7
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 7.7e-67 258.5 168 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 6.7e-63 245.4 215 54.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.9e-57 227.3 194 58.8
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-56 223.4 256 44.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-56 223.4 256 44.9
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 8.0e-56 221.9 182 61.0
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 5.9e-51 205.7 119 77.3
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.7e-45 186.4 131 61.8
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.2e-43 181.4 131 60.3
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.5e-38 164.5 238 38.2
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-37 160.6 131 56.5
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 7.3e-33 145.6 101 65.3
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 2.2e-29 134.0 91 68.1
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 2.3e-26 124.0 260 33.1
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 6.6e-26 122.5 73 74.0
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 5.6e-25 119.4 245 34.3
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.3e-18 98.2 233 30.5
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.7e-18 97.8 63 69.8


User provided reference genes

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