Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.0e-77 292.4 146 100.0
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.6e-45 185.7 148 67.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.0e-44 183.7 145 69.0
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 2.5e-40 169.1 148 62.2
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 5.7e-40 167.9 148 62.8
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 2.4e-38 162.5 150 61.3
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.5e-35 151.4 151 55.0
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.5e-35 151.4 151 55.0
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.4e-33 146.7 151 51.7
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 5.7e-32 141.4 151 53.0
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 6.3e-31 137.9 149 51.7
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 2.4e-30 136.0 151 49.7
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.1e-30 135.2 152 48.7
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 9.1e-30 134.0 147 48.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.5e-29 133.3 148 50.0
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 2.6e-29 132.5 149 50.3
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 3.4e-29 132.1 149 46.3
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 3.4e-29 132.1 152 48.7
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 4.5e-29 131.7 149 46.3
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 5.9e-29 131.3 149 45.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 7.7e-29 131.0 148 48.6
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.0e-28 130.6 149 46.3
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.0e-28 130.6 151 48.3
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.9e-28 129.0 149 45.6
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.1e-27 127.1 148 48.6
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.4e-27 126.7 148 45.9
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.4e-27 126.7 148 47.3
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.9e-27 126.3 152 47.4
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.5e-27 125.9 148 46.6
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 3.2e-27 125.6 151 45.7
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 5.5e-27 124.8 147 46.9
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.2e-26 123.6 147 47.6
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.6e-26 123.2 148 43.2
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 2.1e-26 122.9 152 46.7
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 2.7e-26 122.5 149 44.3
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 7.9e-26 120.9 149 45.6
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.0e-25 120.6 150 46.7
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.8e-25 119.8 149 44.3
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 2.3e-25 119.4 145 43.4
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 3.9e-25 118.6 148 43.2
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 3.9e-25 118.6 146 45.9
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 6.7e-25 117.9 148 45.9
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.1e-24 117.1 148 44.6
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.1e-24 117.1 146 43.2
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.3e-24 115.5 145 44.1
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 4.4e-24 115.2 150 42.0
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 4.4e-24 115.2 145 43.4
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 9.7e-24 114.0 151 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.7e-23 113.2 149 45.6
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.7e-23 113.2 145 44.8
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 3.7e-23 112.1 148 44.6
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.7e-23 112.1 150 43.3
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 8.2e-23 110.9 147 42.9
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.1e-22 110.5 151 41.7
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.4e-22 110.2 150 41.3
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.1e-22 108.6 122 53.3
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 4.1e-22 108.6 145 44.1
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 4.1e-22 108.6 151 41.7
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 4.1e-22 108.6 151 43.7
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 9.1e-22 107.5 109 49.5
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.2e-21 107.1 149 43.6
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.5e-21 106.7 150 40.7
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.9e-21 104.8 151 40.4
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.0e-20 104.0 146 41.8
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.3e-20 103.6 151 40.4
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 1.3e-20 103.6 145 43.4
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 2.2e-20 102.8 150 40.0
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.8e-20 102.1 146 41.1
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.8e-20 102.1 144 43.8
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 3.8e-20 102.1 148 39.9
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 3.8e-20 102.1 148 39.2
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 5.0e-20 101.7 150 42.0
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 5.0e-20 101.7 150 40.0
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.5e-19 99.4 92 47.8
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.7e-18 95.9 97 51.5
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 6.1e-18 94.7 145 37.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.0e-17 94.0 153 38.6
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 2.3e-17 92.8 143 39.9
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 6.7e-17 91.3 152 37.5
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.1e-16 90.5 151 37.1
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.3e-16 89.0 147 35.4
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.8e-15 85.9 147 35.4
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 4.8e-15 85.1 147 36.1
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 6.3e-15 84.7 148 37.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.4e-14 82.8 147 35.4
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.4e-14 82.8 148 34.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 4.1e-14 82.0 151 35.1
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 5.3e-14 81.6 155 31.6
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 7.0e-14 81.3 151 34.4
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.6e-13 80.1 149 35.6
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.9e-12 75.9 142 33.1
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 8.5e-12 74.3 148 36.5
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.9e-11 73.2 63 54.0
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.4e-09 67.0 95 42.1
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 4.0e-09 65.5 161 30.4
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 8.8e-09 64.3 117 40.2


User provided reference genes

Program Settings