Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.0e-221 771.5 385 100.0
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 6.2e-195 684.1 379 91.0
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 3.7e-171 605.1 379 81.5
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 7.9e-166 587.4 380 79.2
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.0e-165 587.0 379 80.2
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 6.3e-131 471.5 365 65.5
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.1e-126 456.4 380 61.1
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.4e-124 449.1 357 63.6
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 3.4e-124 449.1 378 60.3
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 2.2e-123 446.4 379 59.6
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.6e-121 440.3 379 58.6
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.0e-120 437.6 366 61.2
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 2.3e-120 436.4 377 59.2
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.3e-115 418.3 380 56.1
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.2e-113 414.1 382 56.8
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 7.8e-113 411.4 381 55.9
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.3e-112 410.6 380 55.5
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.7e-112 410.2 380 54.2
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 2.3e-112 409.8 380 54.5
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 3.8e-112 409.1 380 55.8
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.5e-111 407.1 380 55.5
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.5e-111 406.4 381 55.1
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.8e-110 402.9 361 57.9
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 1.4e-109 400.6 382 53.9
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.8e-109 400.2 380 53.9
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 2.3e-109 399.8 372 55.4
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 5.2e-109 398.7 380 52.9
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.5e-108 397.1 378 53.2
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 3.4e-108 396.0 381 54.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 4.4e-108 395.6 356 57.0
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.3e-107 394.0 381 53.0
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.2e-107 393.3 354 57.6
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 6.4e-107 391.7 381 53.5
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.4e-106 390.6 369 55.3
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.8e-106 390.2 381 54.3
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 4.1e-106 389.0 378 52.1
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.3e-104 384.0 381 52.5
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.3e-104 384.0 379 52.0
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 3.0e-104 382.9 381 51.7
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.5e-103 380.6 380 51.3
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 9.5e-103 377.9 387 50.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 6.2e-102 375.2 376 53.5
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 8.0e-102 374.8 304 62.2
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 8.0e-102 374.8 380 50.5
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 6.8e-101 371.7 380 51.3
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 4.4e-100 369.0 380 51.6
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 7.5e-100 368.2 380 52.4
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 2.9e-99 366.3 381 50.1
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 1.4e-98 364.0 378 51.3
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.4e-98 364.0 379 50.1
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 9.2e-98 361.3 379 50.9
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 4.6e-97 359.0 365 50.7
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.1e-95 354.4 358 53.1
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.6e-94 350.5 338 53.0
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.8e-94 349.7 384 51.3
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.1e-93 346.3 320 54.7
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 5.8e-92 342.0 363 53.2
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 7.5e-92 341.7 378 48.7
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 1.3e-88 330.9 339 51.3
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 8.6e-88 328.2 371 46.4
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.9e-87 327.0 377 47.2
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 2.5e-87 326.6 281 60.1
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 2.5e-87 326.6 364 48.9
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.6e-86 323.9 381 45.9
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 4.7e-86 322.4 378 46.8
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.2e-84 317.8 379 46.4
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 3.2e-82 309.7 366 48.1
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.5e-79 300.8 261 58.6
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.9e-79 300.4 381 42.5
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 5.6e-79 298.9 262 56.9
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 9.6e-79 298.1 381 42.0
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.6e-78 297.4 384 46.1
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 2.8e-78 296.6 373 42.9
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.4e-77 294.3 375 43.5
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.2e-76 291.2 378 41.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.3e-75 287.7 378 41.8
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.8e-75 286.2 405 41.2
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 7.1e-74 282.0 373 40.8
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.7e-73 280.0 378 40.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 1.3e-72 277.7 373 40.8
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.3e-72 276.9 373 41.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 2.2e-67 260.4 473 36.2
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.2e-65 254.6 375 38.1
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 6.0e-65 252.3 374 38.0
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 2.1e-62 243.8 368 39.1
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 6.2e-62 242.3 241 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 6.9e-61 238.8 263 49.4
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 2.1e-57 227.3 258 48.1
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.4e-53 213.8 380 35.0
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 5.3e-53 212.6 381 36.0
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.4e-52 209.9 369 36.3
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.0e-44 184.1 145 69.0
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 8.5e-43 178.7 263 38.4
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.1e-41 174.1 370 33.5
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 8.2e-38 162.2 382 31.9
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 8.2e-38 162.2 364 32.4
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.5e-34 149.4 132 55.3
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.6e-33 146.7 373 32.4
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 5.1e-32 142.9 143 51.0
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.3e-30 138.3 117 55.6
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.5e-28 131.3 336 31.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.6e-28 130.6 193 41.5
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 3.4e-28 130.2 169 42.6
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.3e-27 128.3 317 31.5
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.6e-23 114.0 103 58.3
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 5.7e-23 112.8 120 49.2
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 9.7e-23 112.1 223 34.1
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.8e-19 100.1 145 41.4
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.3e-14 82.8 114 42.1


User provided reference genes

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