Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 2.8e-72 275.0 126 100.0
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.2e-70 269.6 126 97.6
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 3.7e-64 248.1 124 88.7
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 3.7e-64 248.1 124 88.7
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.1e-52 209.9 115 79.1
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 1.2e-46 189.9 125 73.6
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 6.6e-45 184.1 123 70.7
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 7.3e-44 180.6 123 72.4
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 8.1e-43 177.2 124 64.5
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.8e-42 176.0 124 68.5
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 1.5e-41 172.9 122 63.9
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 2.0e-41 172.6 126 67.5
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 4.4e-41 171.4 124 66.9
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 4.4e-41 171.4 124 66.9
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 5.8e-41 171.0 122 62.3
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 5.8e-41 171.0 122 63.1
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 9.8e-41 170.2 124 63.7
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 1.3e-40 169.9 122 60.7
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 1.3e-40 169.9 124 66.1
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.7e-40 169.5 122 60.7
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 2.2e-40 169.1 124 64.5
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 2.2e-40 169.1 124 65.3
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.9e-40 168.7 122 66.4
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 3.7e-40 168.3 126 64.3
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 4.9e-40 167.9 125 64.8
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 6.4e-40 167.5 122 60.7
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 6.4e-40 167.5 127 66.9
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 8.3e-40 167.2 125 64.0
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.1e-39 166.8 124 59.7
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 1.4e-39 166.4 124 62.9
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 1.9e-39 166.0 126 64.3
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 2.4e-39 165.6 124 62.1
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 2.4e-39 165.6 126 61.9
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.4e-39 165.6 125 61.6
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.4e-39 165.6 125 61.6
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.4e-39 165.6 125 61.6
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.4e-39 165.6 122 60.7
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 3.2e-39 165.2 125 60.8
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.2e-39 165.2 125 60.8
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 3.2e-39 165.2 122 60.7
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 3.2e-39 165.2 125 61.6
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 4.1e-39 164.9 123 65.0
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 4.1e-39 164.9 123 65.0
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 5.4e-39 164.5 128 65.6
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 5.4e-39 164.5 124 58.9
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 5.4e-39 164.5 122 59.8
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 7.1e-39 164.1 122 59.8
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 1.2e-38 163.3 126 62.7
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 1.2e-38 163.3 123 64.2
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 1.2e-38 163.3 123 64.2
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.6e-38 161.4 124 57.3
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 6.0e-38 161.0 122 64.8
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 6.0e-38 161.0 125 61.6
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 6.0e-38 161.0 126 63.5
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 6.0e-38 161.0 124 60.5
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 7.8e-38 160.6 122 59.8
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 1.0e-37 160.2 124 61.3
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 1.3e-37 159.8 124 61.3
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 1.7e-37 159.5 126 65.9
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.3e-37 159.1 123 62.6
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 2.3e-37 159.1 124 61.3
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 2.3e-37 159.1 122 62.3
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 3.9e-37 158.3 128 61.7
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.9e-37 158.3 128 59.4
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 5.1e-37 157.9 124 62.1
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 5.1e-37 157.9 124 62.1
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 5.1e-37 157.9 125 58.4
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 5.1e-37 157.9 127 63.0
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.1e-36 156.8 122 59.8
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 1.5e-36 156.4 124 58.9
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 1.5e-36 156.4 124 59.7
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 3.3e-36 155.2 124 58.9
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 3.3e-36 155.2 126 63.5
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 4.3e-36 154.8 124 58.1
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 5.6e-36 154.5 129 58.1
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 5.6e-36 154.5 124 58.9
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 5.6e-36 154.5 126 59.5
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 5.6e-36 154.5 126 59.5
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 7.3e-36 154.1 124 57.3
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 7.3e-36 154.1 124 57.3
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 7.3e-36 154.1 127 59.8
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 1.2e-35 153.3 124 56.5
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 1.6e-35 152.9 124 57.3
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 2.1e-35 152.5 123 58.5
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 2.8e-35 152.1 126 59.5
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 4.7e-35 151.4 124 56.5
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 2.6e-33 145.6 127 58.3
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 1.7e-32 142.9 127 55.9
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.1e-31 140.2 129 51.9
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.1e-31 140.2 127 54.3
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 3.2e-31 138.7 126 54.8
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 7.1e-31 137.5 113 58.4
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 2.7e-30 135.6 124 54.8
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 1.9e-28 129.4 124 51.6
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 3.3e-28 128.6 127 53.5
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.7e-24 116.3 129 46.5
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 5.4e-23 111.3 91 61.5
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 5.4e-23 111.3 123 44.7
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 5.1e-21 104.8 127 44.1
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 3.3e-20 102.1 125 43.2
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 5.3e-18 94.7 125 39.2
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 7.6e-17 90.9 82 51.2
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 1.9e-15 86.3 44 79.5
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.2e-14 83.6 124 41.9
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.6e-14 83.2 91 47.3
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 2.7e-14 82.4 119 41.2
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.5e-12 76.6 45 73.3
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.1e-11 72.8 44 63.6
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 8.1e-11 70.9 134 38.1
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.4e-07 59.3 40 55.0
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.1e-06 56.2 106 30.2


User provided reference genes

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