Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 6.5e-304 1046.6 529 100.0
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 5.0e-288 993.8 522 96.6
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 4.7e-254 880.9 527 85.2
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 2.9e-251 871.7 534 82.4
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 8.4e-251 870.2 534 82.2
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 1.8e-181 639.8 339 92.0
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 3.0e-176 622.5 535 60.0
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 1.0e-171 607.4 537 58.1
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 3.3e-170 602.4 533 58.3
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 7.3e-170 601.3 537 57.9
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 6.1e-169 598.2 534 59.0
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.2e-167 594.0 528 59.7
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.9e-163 578.9 538 57.4
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 6.6e-163 578.2 536 57.6
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.6e-163 578.2 536 57.6
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.9e-162 576.6 531 57.4
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 2.5e-162 576.2 515 57.9
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 4.3e-162 575.5 536 57.1
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.1e-160 570.9 537 56.2
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 1.2e-159 567.4 532 57.1
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 4.4e-159 565.5 530 55.5
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 3.7e-158 562.4 536 56.0
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 4.9e-158 562.0 523 55.6
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 4.9e-158 562.0 526 54.9
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 6.4e-158 561.6 529 56.0
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.1e-157 560.8 536 54.9
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 4.1e-157 558.9 529 55.0
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 5.4e-157 558.5 518 56.6
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 9.2e-157 557.8 530 56.4
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 9.2e-157 557.8 531 54.2
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.2e-156 557.4 544 53.5
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 2.0e-156 556.6 531 54.4
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 3.0e-155 552.7 526 56.3
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 5.0e-155 552.0 527 54.6
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 8.6e-155 551.2 531 54.6
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 8.6e-155 551.2 530 54.9
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.5e-154 550.4 525 54.7
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.3e-154 548.9 531 54.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 7.3e-154 548.1 531 54.2
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 5.2e-152 542.0 528 53.2
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 4.4e-151 538.9 532 54.5
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.7e-150 537.0 451 62.3
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 6.4e-150 535.0 403 66.5
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 6.4e-150 535.0 417 63.8
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 2.4e-149 533.1 530 52.6
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 5.4e-149 531.9 524 55.3
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 7.1e-149 531.6 523 53.9
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 2.1e-148 530.0 533 54.6
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 7.8e-148 528.1 523 53.9
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 3.0e-147 526.2 536 53.2
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 6.6e-147 525.0 340 75.6
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 4.3e-146 522.3 535 51.4
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 1.6e-145 520.4 478 55.4
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 8.9e-144 514.6 533 53.5
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 1.5e-143 513.8 525 52.8
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.3e-142 510.8 482 53.9
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 2.9e-142 509.6 528 52.7
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 2.9e-142 509.6 545 51.2
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 3.8e-142 509.2 521 51.4
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.1e-141 507.7 403 61.8
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.4e-141 507.3 403 61.8
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 1.9e-141 506.9 533 51.2
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 1.9e-141 506.9 527 51.2
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 5.4e-141 505.4 527 52.6
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 5.4e-141 505.4 531 51.6
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 9.2e-141 504.6 522 51.9
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.2e-140 504.2 522 51.9
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 1.2e-140 504.2 512 54.7
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 1.6e-140 503.8 526 50.4
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 2.1e-140 503.4 522 51.1
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 2.7e-140 503.1 526 51.0
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 6.0e-140 501.9 479 53.9
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 1.0e-139 501.1 521 51.4
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 1.0e-139 501.1 529 51.2
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 1.3e-139 500.7 529 50.3
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 1.7e-139 500.4 533 52.0
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 3.0e-139 499.6 404 61.6
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.1e-138 497.7 526 51.3
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 9.6e-138 494.6 528 51.7
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 1.6e-137 493.8 536 52.1
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 4.7e-137 492.3 536 51.7
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 6.2e-137 491.9 536 51.7
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 1.4e-136 490.7 509 50.7
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.2e-135 487.6 581 47.3
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 2.6e-135 486.5 531 50.7
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 2.9e-134 483.0 341 67.4
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 8.4e-134 481.5 530 49.4
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 9.3e-133 478.0 278 84.5
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 1.7e-131 473.8 399 59.9
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 4.8e-129 465.7 479 52.4
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.1e-128 463.0 558 48.9
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 2.2e-126 456.8 483 52.0
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 6.0e-124 448.7 412 55.6
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 3.3e-122 443.0 458 51.3
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 4.5e-119 432.6 417 55.4
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.7e-118 430.6 538 45.5
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 2.9e-118 429.9 285 72.6
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 3.8e-118 429.5 285 73.0
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 9.6e-114 414.8 300 67.7
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 1.4e-112 411.0 285 69.5
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.8e-112 410.6 291 67.7
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.8e-112 410.6 291 67.7
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 6.9e-112 408.7 284 70.4
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 4.6e-108 396.0 352 53.4
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 4.6e-108 396.0 249 81.9
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 7.4e-106 388.7 449 47.4
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 9.0e-104 381.7 285 65.3
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 1.2e-103 381.3 353 52.7
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.2e-100 371.3 383 49.9
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 7.9e-100 368.6 419 46.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 5.3e-96 355.9 340 55.6
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.5e-93 347.1 353 49.6
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 1.0e-91 341.7 360 52.5
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 3.0e-91 340.1 259 59.8
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.6e-90 337.0 341 49.9
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 2.6e-87 327.0 299 56.5
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 4.7e-76 289.7 286 50.7
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 2.0e-71 274.2 551 31.4
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 2.7e-63 247.3 159 71.7
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.1e-61 241.9 384 37.8
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 3.6e-60 236.9 341 38.7
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 4.9e-57 226.5 191 56.5
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 7.3e-53 212.6 283 42.0
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 8.9e-51 205.7 132 70.5
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 2.4e-48 197.6 195 46.2
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 2.6e-42 177.6 251 45.0
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 1.2e-34 152.1 141 57.4
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.1e-32 145.6 221 39.8
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 7.1e-32 142.9 130 58.5
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 2.8e-28 131.0 223 38.6
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 1.5e-18 98.6 101 52.5
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 1.7e-14 85.1 69 60.9
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.3e-09 68.9 68 47.1


User provided reference genes

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