Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 0.0e+00 1083.6 598 100.0
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 2.1e-282 975.3 608 88.8
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 6.0e-205 718.0 615 69.6
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 4.5e-192 675.2 581 67.5
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 1.4e-190 670.2 612 66.7
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 6.9e-185 651.4 540 70.4
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 2.7e-181 639.4 616 63.3
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 4.8e-61 240.0 675 33.3
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 9.7e-46 189.1 592 32.6
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 3.5e-43 180.6 633 32.2
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 7.7e-43 179.5 627 33.2
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 2.0e-38 164.9 618 31.2
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 4.4e-38 163.7 607 32.1
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 3.7e-37 160.6 612 31.7
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 9.1e-36 156.0 602 32.6
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 1.7e-34 151.8 586 30.7
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 6.5e-34 149.8 581 31.7
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 6.5e-34 149.8 570 31.2
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 6.5e-34 149.8 561 31.9
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 1.5e-33 148.7 600 29.8
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 2.5e-33 147.9 606 32.0
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 2.5e-33 147.9 570 29.5
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 4.2e-33 147.1 619 29.9
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 8.0e-32 142.9 604 30.8
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 2.6e-30 137.9 787 25.7
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 4.4e-30 137.1 596 28.9
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 1.3e-29 135.6 564 28.5
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 1.7e-29 135.2 565 29.6
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 4.1e-28 130.6 431 33.4
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 1.0e-26 125.9 682 26.2
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 1.3e-26 125.6 630 27.6
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 1.7e-26 125.2 561 27.8
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 3.8e-26 124.0 632 27.8
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 3.8e-26 124.0 694 25.8
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 5.0e-26 123.6 591 28.9
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 4.2e-25 120.6 575 28.2
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 2.1e-24 118.2 613 26.9
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 2.1e-24 118.2 585 28.4
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 1.5e-22 112.1 577 27.4
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 1.5e-22 112.1 622 25.1
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 5.7e-22 110.2 691 25.3
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 2.8e-21 107.8 69 71.0
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 4.9e-21 107.1 129 50.4
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 6.3e-21 106.7 741 26.2
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 6.3e-21 106.7 646 26.6
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 2.4e-20 104.8 458 30.3
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 2.4e-20 104.8 168 42.3
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 5.4e-20 103.6 666 25.8
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 5.9e-19 100.1 430 29.5
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 5.9e-19 100.1 606 24.9
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 1.7e-18 98.6 408 30.6
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 2.3e-18 98.2 79 54.4
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 3.8e-18 97.4 173 41.6
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 8.6e-18 96.3 77 59.7
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 3.3e-17 94.4 69 65.2
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 4.3e-17 94.0 73 56.2
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 7.3e-17 93.2 68 63.2
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 9.5e-17 92.8 609 26.8
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 2.8e-16 91.3 627 24.9
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 2.8e-16 91.3 554 25.6
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.0e-15 89.4 72 65.3
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.0e-15 89.4 566 25.4
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 1.8e-15 88.6 393 32.3
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 5.2e-15 87.0 142 37.3
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 6.8e-15 86.7 601 24.6
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.5e-14 85.5 597 25.6
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 3.4e-14 84.3 71 52.1
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 5.8e-14 83.6 70 55.7
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 9.8e-14 82.8 71 53.5
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.2e-13 81.6 243 30.9
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.2e-13 81.6 690 25.9
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 3.7e-13 80.9 68 57.4
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 4.9e-13 80.5 219 34.7
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 4.9e-13 80.5 501 29.1
ATR0609G018 Amborella trichopoda HOM05D007504 ORTHO05D007629 1.4e-12 79.0 195 36.4
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.8e-12 78.6 159 32.1
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 2.4e-12 78.2 770 23.5
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 3.2e-12 77.8 557 24.1
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 4.1e-12 77.4 133 34.6
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 4.1e-12 77.4 65 50.8
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 5.4e-12 77.0 579 24.9
Haze_03334 Corylus avellana HOM05D007504 ORTHO05D007629 7.0e-12 76.6 105 47.6
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 9.2e-12 76.3 71 50.7
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.2e-11 75.9 68 54.4
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 1.2e-11 75.9 262 31.7
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 2.0e-11 75.1 560 25.2
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 3.5e-11 74.3 659 23.7
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 4.6e-11 73.9 230 33.0
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 6.0e-11 73.6 71 47.9
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 7.8e-11 73.2 115 42.6
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 1.0e-10 72.8 151 31.8
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 1.0e-10 72.8 352 29.0
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 1.3e-10 72.4 637 24.2
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 1.7e-10 72.0 607 24.9
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 8.6e-10 69.7 258 31.8
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 8.6e-10 69.7 266 32.7
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 8.6e-10 69.7 612 24.5
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 1.1e-09 69.3 213 31.9
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 1.1e-09 69.3 299 27.4
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 1.9e-09 68.6 82 40.2
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.9e-09 68.6 82 40.2
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.9e-09 68.6 82 40.2
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 2.5e-09 68.2 125 36.0
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 3.3e-09 67.8 76 43.4
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 3.3e-09 67.8 245 30.2
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 4.3e-09 67.4 199 33.2
HPP92_020229 Vanilla planifolia HOM05D007504 ORTHO05D007629 4.3e-09 67.4 61 49.2
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 5.6e-09 67.0 264 32.2
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.1e-08 65.1 97 39.2
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 2.1e-08 65.1 87 39.1
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 2.1e-08 65.1 210 31.9
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 6.2e-08 63.5 201 32.3
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 8.0e-08 63.2 156 32.7
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 8.0e-08 63.2 770 22.6
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 8.0e-08 63.2 50 56.0
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 4.0e-07 60.8 222 31.5
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 8.9e-07 59.7 253 28.9
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.2e-06 59.3 255 27.5
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 2.0e-06 58.5 44 61.4
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.4e-06 57.8 354 27.4
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 3.4e-06 57.8 209 31.1


User provided reference genes

Program Settings