Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000271g0270 Nicotiana tabacum HOM05D006479 ORTHO05D008310 7.1e-104 380.6 186 100.0
Nitab4.5_0006265g0010 Nicotiana tabacum HOM05D006479 ORTHO05D008310 2.6e-66 255.8 128 96.9
PGSC0003DMG400005946 Solanum tuberosum HOM05D006479 ORTHO05D008310 2.1e-55 219.5 128 82.8
Sopen06g030060 Solanum pennellii HOM05D006479 ORTHO05D008310 3.6e-55 218.8 128 82.8
Solyc06g073650.1 Solanum lycopersicum HOM05D006479 ORTHO05D008310 5.1e-54 214.9 125 83.2
PGSC0003DMG400027398 Solanum tuberosum HOM05D006479 ORTHO05D008310 5.9e-42 174.9 145 60.7
CAN.G280.16 Capsicum annuum HOM05D006479 ORTHO05D008310 2.9e-41 172.6 168 56.0
Solyc11g072050.1 Solanum lycopersicum HOM05D006479 ORTHO05D008310 3.8e-41 172.2 145 60.7
Sopen11g029700 Solanum pennellii HOM05D006479 ORTHO05D008310 3.8e-41 172.2 145 60.7
Nitab4.5_0008289g0040 Nicotiana tabacum HOM05D006479 ORTHO05D008310 2.1e-39 166.4 145 60.7
Nitab4.5_0000205g0010 Nicotiana tabacum HOM05D006479 ORTHO05D008310 4.4e-37 158.7 144 59.0
Peaxi162Scf00978g00216 Petunia axillaris HOM05D006479 ORTHO05D008310 2.4e-35 152.9 145 54.5
CAN.G65.211 Capsicum annuum HOM05D006479 ORTHO05D008310 6.8e-30 134.8 92 70.7
COL.COLO4_25288 Corchorus olitorius HOM05D006479 ORTHO05D008310 1.2e-29 134.0 132 56.1
Cfa010250 Carpinus fangiana HOM05D006479 ORTHO05D008310 1.4e-27 127.1 136 50.7
CSS0011125 Camellia sinensis var. sinensis HOM05D006479 ORTHO05D008310 3.1e-27 125.9 165 46.7
CSS0016000 Camellia sinensis var. sinensis HOM05D006479 ORTHO05D008310 3.1e-27 125.9 165 46.7
Gohir.A05G075300 Gossypium hirsutum HOM05D006479 ORTHO05D008310 7.0e-27 124.8 129 50.4
Thecc.09G263400 Theobroma cacao HOM05D006479 ORTHO05D008310 7.0e-27 124.8 132 53.0
Haze_23643 Corylus avellana HOM05D006479 ORTHO05D008310 1.2e-26 124.0 136 48.5
Duzib168G1317 Durio zibethinus HOM05D006479 ORTHO05D008310 4.5e-26 122.1 132 51.5
Gohir.D05G078100 Gossypium hirsutum HOM05D006479 ORTHO05D008310 5.9e-26 121.7 129 50.4
Gorai.009G079600 Gossypium raimondii HOM05D006479 ORTHO05D008310 5.9e-26 121.7 129 50.4
Cc01_g07460 Coffea canephora HOM05D006479 ORTHO05D008310 1.7e-25 120.2 136 50.0
Oeu025955.1 Olea europaea HOM05D006479 ORTHO05D008310 2.3e-25 119.8 139 49.6
TWI31G0851 Tripterygium wilfordii HOM05D006479 ORTHO05D008310 2.3e-25 119.8 134 52.2
Rhsim13G0200600 Rhododendron simsii HOM05D006479 ORTHO05D008310 6.6e-25 118.2 149 47.0
Actinidia07016 Actinidia chinensis HOM05D006479 ORTHO05D008310 8.6e-25 117.9 116 54.3
MSTRG.17656 Avicennia marina HOM05D006479 ORTHO05D008310 8.6e-25 117.9 133 49.6
Ciclev10014249m.g Citrus clementina HOM05D006479 ORTHO05D008310 8.6e-25 117.9 134 50.7
Hma1.2p1_0218F.1_g092540 Hydrangea macrophylla HOM05D006479 ORTHO05D008310 1.1e-24 117.5 153 45.1
CiPaw.14G092100 Carya illinoinensis HOM05D006479 ORTHO05D008310 1.9e-24 116.7 156 44.2
Potri.009G157900 Populus trichocarpa HOM05D006479 ORTHO05D008310 2.5e-24 116.3 129 51.9
FvH4_3g27150 Fragaria vesca HOM05D006479 ORTHO05D008310 7.2e-24 114.8 143 50.3
FAN11G0648 Fragaria x ananassa HOM05D006479 ORTHO05D008310 7.2e-24 114.8 143 50.3
Oeu032070.1 Olea europaea HOM05D006479 ORTHO05D008310 7.2e-24 114.8 132 50.8
Lj2C905T5 Lonicera japonica HOM05D006479 ORTHO05D008310 9.5e-24 114.4 152 46.7
QL01p020440 Quercus lobata HOM05D006479 ORTHO05D008310 9.5e-24 114.4 97 61.9
DCAR_002128 Daucus carota HOM05D006479 ORTHO05D008310 1.2e-23 114.0 88 62.5
Duzib150G0338 Durio zibethinus HOM05D006479 ORTHO05D008310 1.2e-23 114.0 133 48.9
FAN25G2741 Fragaria x ananassa HOM05D006479 ORTHO05D008310 1.2e-23 114.0 137 49.6
Manes.04G055500 Manihot esculenta HOM05D006479 ORTHO05D008310 2.8e-23 112.8 125 51.2
Cpa.g.sc103.78 Carica papaya HOM05D006479 ORTHO05D008310 4.7e-23 112.1 133 50.4
FAN16G0753 Fragaria x ananassa HOM05D006479 ORTHO05D008310 4.7e-23 112.1 140 52.1
MELO3C014710.2 Cucumis melo HOM05D006479 ORTHO05D008310 1.0e-22 110.9 122 49.2
ClCG02G024250 Citrullus lanatus HOM05D006479 ORTHO05D008310 2.3e-22 109.8 125 48.8
Sp6g23500 Schrenkiella parvula HOM05D006479 ORTHO05D008310 2.3e-22 109.8 136 51.5
LjContig00564g0006585 Lotus japonicus HOM05D006479 ORTHO05D008310 8.9e-22 107.8 71 67.6
Sed0023099 Sechium edule HOM05D006479 ORTHO05D010107 8.9e-22 107.8 130 49.2
TWI79G0137 Tripterygium wilfordii HOM05D006479 ORTHO05D008310 8.9e-22 107.8 120 52.5
HanXRQChr16g0509731 Helianthus annuus HOM05D006479 ORTHO05D008310 1.2e-21 107.5 122 48.4
FAN21G3675 Fragaria x ananassa HOM05D006479 ORTHO05D008310 2.0e-21 106.7 99 59.6
Medtr5g087680 Medicago truncatula HOM05D006479 ORTHO05D008310 2.0e-21 106.7 88 60.2
RcHm_v2.0_Chr5g0049781 Rosa chinensis HOM05D006479 ORTHO05D008310 2.0e-21 106.7 62 79.0
Ca_06149_v3 Cicer arietinum L. HOM05D006479 ORTHO05D008310 3.4e-21 105.9 91 58.2
Thhalv10016076m.g Eutrema salsugineum HOM05D006479 ORTHO05D008310 7.5e-21 104.8 143 48.3
Sabra09G0123500 Salix brachista HOM05D006479 ORTHO05D008310 7.5e-21 104.8 128 49.2
CsaV3_4G017380 Cucumis sativus L. HOM05D006479 ORTHO05D008310 9.8e-21 104.4 126 50.0
Migut.N02413 Erythranthe guttata HOM05D006479 ORTHO05D008310 9.8e-21 104.4 129 48.8
MD00G1031900 Malus domestica HOM05D006479 ORTHO05D008310 9.8e-21 104.4 74 62.2
PGR119G2537 Punica granatum HOM05D006479 ORTHO05D008310 9.8e-21 104.4 147 44.2
Sc21g0006530 Simmondsia chinensis HOM05D006479 ORTHO05D008310 1.3e-20 104.0 136 46.3
AL6G32590 Arabidopsis lyrata HOM05D006479 ORTHO05D008310 1.7e-20 103.6 134 47.8
arahy.Tifrunner.gnm1.ann1.K8UYYD Arachis hypogaea HOM05D006479 ORTHO05D008310 2.8e-20 102.8 112 50.0
arahy.Tifrunner.gnm1.ann1.Y6PBB0 Arachis hypogaea HOM05D006479 ORTHO05D008310 2.8e-20 102.8 112 50.0
TPR.G11782 Trifolium pratense HOM05D006479 ORTHO05D008310 3.7e-20 102.4 140 43.6
Eucgr.J00620 Eucalyptus grandis HOM05D006479 ORTHO05D008310 4.9e-20 102.1 155 43.2
AUR62020174 Chenopodium quinoa HOM05D006479 ORTHO05D008310 6.3e-20 101.7 60 71.7
Prupe.6G152700 Prunus persica HOM05D006479 ORTHO05D008310 6.3e-20 101.7 75 64.0
Lsat_1_v5_gn_8_104041 Lactuca sativa HOM05D006479 ORTHO05D008310 8.3e-20 101.3 118 45.8
Lalb_Chr10g0105871 Lupinus albus HOM05D006479 ORTHO05D008310 1.1e-19 100.9 111 47.7
AT5G21040 Arabidopsis thaliana HOM05D006479 ORTHO05D008310 1.4e-19 100.5 133 46.6
EL10Ac7g16227 Beta vulgaris HOM05D006479 ORTHO05D008310 1.4e-19 100.5 61 72.1
Glyma.14G044300 Glycine max HOM05D006479 ORTHO05D008310 1.4e-19 100.5 95 52.6
CANSAT54G0955 Cannabis sativa HOM05D006479 ORTHO05D008310 3.1e-19 99.4 100 54.0
SGA_v2.0_scaffold16G07575 Striga asiatica HOM05D006479 ORTHO05D008310 3.1e-19 99.4 135 43.7
TAR633G1538 Trochodendron aralioides HOM05D006479 ORTHO05D008310 3.1e-19 99.4 96 52.1
AUR62001606 Chenopodium quinoa HOM05D006479 ORTHO05D008310 4.1e-19 99.0 53 77.4
VMungo0647G2395 Vigna mungo HOM05D006479 ORTHO05D008310 4.1e-19 99.0 88 55.7
Atru.chr3.2921 Acer truncatum HOM05D006479 ORTHO05D008310 7.0e-19 98.2 132 43.9
Glyma.02G273700 Glycine max HOM05D006479 ORTHO05D008310 9.2e-19 97.8 88 55.7
Aa31LG1G13720 Aethionema arabicum HOM05D006479 ORTHO05D008310 1.2e-18 97.4 131 49.6
ECA236G3846 Erigeron canadensis HOM05D006479 ORTHO05D008310 1.2e-18 97.4 139 39.6
MD11G1180000 Malus domestica HOM05D006479 ORTHO05D008310 1.2e-18 97.4 75 61.3
Nitab4.5_0001757g0060 Nicotiana tabacum HOM05D006479 ORTHO05D008310 3.5e-18 95.9 55 89.1
GSVIVG01037436001 Vitis vinifera HOM05D006479 ORTHO05D008310 5.9e-18 95.1 54 77.8
CARHR191830 Cardamine hirsuta HOM05D006479 ORTHO05D008310 7.8e-18 94.7 87 57.5
BcaC04g19499 Brassica carinata HOM05D006479 ORTHO05D008310 2.9e-17 92.8 54 74.1
A10p19030 Brassica napus HOM05D006479 ORTHO05D008310 3.9e-17 92.4 53 75.5
C09p55040 Brassica napus HOM05D006479 ORTHO05D008310 3.9e-17 92.4 53 75.5
BolC9t58367H Brassica oleracea HOM05D006479 ORTHO05D008310 3.9e-17 92.4 53 75.5
BraA10t43981Z Brassica rapa HOM05D006479 ORTHO05D008310 3.9e-17 92.4 53 75.5
HPP92_021206 Vanilla planifolia HOM05D006479 ORTHO05D008310 3.9e-17 92.4 66 56.1
THA.LOC104810966 Tarenaya hassleriana HOM05D006479 ORTHO05D008310 5.0e-17 92.0 140 43.6
MBI13_g00570_MAGBIO Magnolia biondii HOM05D006479 ORTHO05D008310 8.6e-17 91.3 54 72.2
Psat2g023000 Pisum sativum HOM05D006479 ORTHO05D008310 8.6e-17 91.3 54 75.9
Carub.0006s1934 Capsella rubella HOM05D006479 ORTHO05D008310 3.3e-16 89.4 134 44.0
ATR0068G008 Amborella trichopoda HOM05D006479 ORTHO05D008310 7.3e-16 88.2 54 70.4
Migut.D00711 Erythranthe guttata HOM05D006479 ORTHO05D008310 1.4e-14 84.0 129 40.3
SHI25344 Sapria himalayana HOM05D006479 ORTHO05D008310 2.3e-14 83.2 119 45.4
Aqoxy1G00109 Aquilegia oxysepala HOM05D006479 ORTHO05D008310 1.5e-13 80.5 94 46.8
Os04g0619700 Oryza sativa ssp. japonica HOM05D006479 ORTHO05D008310 1.5e-13 80.5 103 45.6
Ah.08g222720 Amaranthus hybridus HOM05D006479 ORTHO05D008310 3.4e-13 79.3 54 63.0
PSO384G3454 Papaver somniferum HOM05D006479 ORTHO05D008310 1.3e-12 77.4 136 35.3
PSO339G5772 Papaver somniferum HOM05D006479 ORTHO05D008310 2.2e-12 76.6 136 35.3
CDE02G1192 Ceratophyllum demersum HOM05D006479 ORTHO05D008310 3.7e-12 75.9 56 57.1
SEGI_01115 Sequoiadendron giganteum HOM05D006479 ORTHO05D008310 4.9e-12 75.5 123 38.2
SMO358G0705 Selaginella moellendorffii HOM05D006479 ORTHO05D008310 8.3e-12 74.7 62 54.8
Mapoly0060s0027 Marchantia polymorpha HOM05D006479 ORTHO05D008310 7.0e-11 71.6 86 43.0
Zm00001eb431140 Zea mays HOM05D006479 ORTHO05D008310 7.0e-11 71.6 87 42.5
CDE08G0797 Ceratophyllum demersum HOM05D006479 ORTHO05D008310 1.2e-10 70.9 56 55.4
Pp3c4_8230 Physcomitrium patens HOM05D006479 ORTHO05D008310 3.9e-09 65.9 84 44.0
SEGI_34026 Sequoiadendron giganteum HOM05D006479 ORTHO05D008310 6.6e-09 65.1 59 49.2


User provided reference genes

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