Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.9e-290 1001.1 492 100.0
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.0e-283 978.4 489 97.8
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 5.9e-283 976.9 487 97.5
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 1.5e-281 972.2 487 97.1
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 1.5e-281 972.2 487 97.1
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 4.7e-280 967.2 488 96.7
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 6.3e-277 956.8 482 96.1
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.2e-269 931.8 485 92.4
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.1e-268 929.5 487 92.6
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.4e-268 929.1 488 91.2
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 1.8e-268 928.7 487 93.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.8e-268 928.7 485 91.8
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 7.0e-268 926.8 485 91.3
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 9.2e-268 926.4 485 90.5
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.0e-267 925.2 485 91.3
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.0e-267 925.2 485 91.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 2.0e-267 925.2 487 91.6
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 2.7e-267 924.9 486 92.2
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 4.5e-267 924.1 488 91.4
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.9e-267 923.7 487 92.0
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 7.8e-267 923.3 483 92.5
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 7.8e-267 923.3 484 90.9
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 1.0e-266 922.9 485 90.9
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.3e-266 922.5 485 91.1
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.0e-266 920.6 485 90.3
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 6.6e-266 920.2 485 90.7
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 6.6e-266 920.2 485 92.4
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.1e-265 919.5 485 91.5
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.1e-265 919.5 484 91.5
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 1.9e-265 918.7 489 90.4
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 2.5e-265 918.3 487 91.4
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 5.6e-265 917.1 485 90.9
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 7.3e-265 916.8 482 91.5
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 7.3e-265 916.8 483 91.5
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.1e-264 915.2 485 91.3
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.8e-264 914.8 485 89.9
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 2.8e-264 914.8 483 91.3
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 3.6e-264 914.4 485 91.5
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 3.6e-264 914.4 485 91.5
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 4.7e-264 914.1 481 91.3
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 6.1e-264 913.7 487 90.3
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 6.1e-264 913.7 485 91.5
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 8.0e-264 913.3 483 90.5
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 8.0e-264 913.3 485 90.9
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 1.0e-263 912.9 481 91.5
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.0e-263 912.9 485 90.7
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.4e-263 912.5 485 90.5
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.8e-263 912.1 481 91.7
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 1.8e-263 912.1 487 90.6
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 90.3
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 2.3e-263 911.8 486 91.4
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 2.3e-263 911.8 486 91.4
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.3e-263 911.8 485 90.5
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 3.0e-263 911.4 485 91.1
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.0e-263 911.4 485 91.5
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 3.0e-263 911.4 485 90.7
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 4.0e-263 911.0 485 89.9
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.0e-263 911.0 483 90.5
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 4.0e-263 911.0 481 91.7
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 4.0e-263 911.0 490 90.4
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 6.8e-263 910.2 485 91.3
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 6.8e-263 910.2 485 91.5
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 6.8e-263 910.2 485 90.3
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.8e-263 910.2 486 90.5
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 8.9e-263 909.8 485 91.3
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 8.9e-263 909.8 486 91.2
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 8.9e-263 909.8 481 91.3
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.2e-262 909.4 485 90.3
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 1.2e-262 909.4 485 90.9
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 2.0e-262 908.7 485 90.9
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 2.6e-262 908.3 489 90.4
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.6e-262 908.3 486 89.9
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 3.4e-262 907.9 482 90.7
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 4.4e-262 907.5 485 91.1
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 4.4e-262 907.5 485 91.3
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 5.8e-262 907.1 487 90.6
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 5.8e-262 907.1 489 90.2
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.3e-261 906.0 487 91.4
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 1.7e-261 905.6 482 90.2
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 2.2e-261 905.2 485 91.3
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 2.2e-261 905.2 487 89.3
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 3.7e-261 904.4 485 90.7
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.4e-261 903.7 485 88.7
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 8.3e-261 903.3 486 89.5
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 8.3e-261 903.3 490 90.2
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 1.4e-260 902.5 485 90.5
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 1.8e-260 902.1 483 91.1
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 2.4e-260 901.7 487 90.8
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 3.2e-260 901.4 473 91.3
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.4e-260 900.6 485 88.5
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 7.0e-260 900.2 485 89.5
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 7.0e-260 900.2 474 91.8
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 1.6e-259 899.0 481 89.8
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 2.0e-259 898.7 478 90.2
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.5e-259 897.9 483 90.5
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 3.5e-259 897.9 485 89.7
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 7.8e-259 896.7 484 90.7
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 5.0e-258 894.0 487 89.3
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 8.6e-258 893.3 484 88.6
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.5e-257 892.5 484 88.8
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.6e-256 889.0 487 87.9
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 6.2e-256 887.1 487 87.9
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.4e-255 885.9 459 93.0
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 5.8e-254 880.6 452 92.5
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 8.3e-253 876.7 471 90.7
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 1.2e-251 872.8 491 87.8
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 3.5e-251 871.3 459 91.5
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 2.3e-250 868.6 483 87.6
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.1e-247 859.8 457 89.5
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.5e-246 853.6 482 85.7
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.1e-244 849.7 484 84.1
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 5.4e-244 847.4 454 89.2
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 8.6e-242 840.1 438 89.7
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.1e-241 839.7 480 82.9
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 7.6e-238 827.0 430 89.1
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.3e-237 826.2 456 85.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 2.9e-237 825.1 409 95.4
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.2e-235 819.7 407 94.8
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.7e-235 818.5 407 94.3
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 6.6e-234 813.9 406 93.8
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.9e-233 812.4 405 93.8
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.7e-229 799.3 435 86.7
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.5e-225 786.2 486 79.2
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 5.8e-222 774.2 427 84.1
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 7.6e-222 773.9 386 94.6
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 1.2e-219 766.5 420 83.6
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 3.0e-218 761.9 435 80.9
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 4.9e-213 744.6 392 89.5
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.9e-209 732.6 392 89.8
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.3e-208 729.9 480 76.7
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 7.4e-193 677.6 370 88.9
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.5e-188 661.4 346 90.2
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.8e-186 656.4 395 76.5
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.0e-182 642.9 485 69.9
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.6e-174 616.7 317 91.8
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.8e-173 612.1 487 67.4
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.9e-172 609.8 485 67.4
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.3e-170 602.8 485 67.0
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 1.7e-168 596.7 331 87.9
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.6e-145 519.6 279 87.5
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.3e-138 496.5 351 70.4
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 4.1e-127 459.1 276 76.8
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.9e-112 409.8 203 94.6
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.9e-104 382.5 492 48.8
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.8e-99 365.9 180 93.3
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.2e-95 353.2 221 76.5
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.8e-93 347.4 174 95.4
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 7.6e-89 332.0 170 90.6
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.8e-74 284.3 146 89.0
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.5e-68 264.6 162 84.6
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 1.7e-67 261.2 129 98.4
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.8e-66 257.7 146 84.2
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 4.2e-63 246.5 127 87.4
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 6.1e-62 242.7 146 84.2
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.7e-54 216.5 254 44.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.4e-53 214.9 126 85.7
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 6.3e-51 206.1 100 94.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.9e-48 197.2 102 89.2
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.8e-40 170.2 107 78.5
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 7.5e-36 156.0 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 8.3e-35 152.5 76 97.4
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 8.3e-35 152.5 76 97.4
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 8.9e-29 132.5 68 97.1
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 5.8e-28 129.8 197 36.0
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-27 128.6 70 88.6
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.3e-27 125.9 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.3e-27 125.9 65 92.3
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.2e-26 124.0 68 86.8
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.3e-24 117.9 65 86.2
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.0e-24 116.7 65 84.6
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 8.1e-22 109.4 67 71.6
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.4e-21 108.6 65 78.5
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 3.7e-19 100.5 66 68.2
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.1e-18 97.1 62 93.5
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.0e-17 93.2 62 79.0
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.8e-17 92.8 48 87.5
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 7.3e-15 86.3 168 36.9
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 8.9e-13 79.3 72 58.3
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 1.2e-12 79.0 71 54.9
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 2.0e-12 78.2 72 58.3
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.6e-09 68.6 61 57.4


User provided reference genes

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