Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 7.2e-107 390.6 196 100.0
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 2.0e-93 345.9 221 81.9
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.9e-70 269.6 221 67.0
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 2.1e-58 229.6 220 60.9
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.2e-53 213.8 220 59.5
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 3.5e-53 212.2 220 60.0
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 4.6e-53 211.8 220 59.1
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 3.5e-45 185.7 228 50.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 1.9e-43 179.9 227 47.6
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.3e-43 179.1 226 47.8
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 5.6e-43 178.3 209 52.2
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.6e-42 176.8 211 49.3
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.6e-42 176.8 230 46.5
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.8e-42 175.3 209 51.7
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 6.2e-42 174.9 229 46.7
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 6.2e-42 174.9 225 44.9
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 6.2e-42 174.9 226 47.8
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 8.1e-42 174.5 230 49.6
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 1.5e-40 170.2 225 45.3
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 3.4e-40 169.1 188 52.1
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.4e-40 169.1 226 47.3
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 3.4e-40 169.1 227 45.8
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 4.5e-40 168.7 226 47.8
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 7.6e-40 167.9 226 47.3
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 7.6e-40 167.9 227 48.5
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.7e-39 166.8 190 53.7
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.7e-39 166.8 227 48.5
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 3.8e-39 165.6 175 50.3
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 8.4e-39 164.5 226 45.6
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.1e-38 164.1 212 46.7
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 4.2e-38 162.2 237 43.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 4.2e-38 162.2 202 46.5
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.2e-38 162.2 176 50.6
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.2e-38 162.2 176 50.6
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 5.4e-38 161.8 182 48.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 9.3e-38 161.0 200 46.5
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 9.3e-38 161.0 176 50.0
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.6e-37 160.2 190 48.4
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 2.7e-37 159.5 227 44.1
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 3.5e-37 159.1 220 46.4
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 4.6e-37 158.7 231 45.5
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 6.0e-37 158.3 208 47.6
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.3e-36 157.1 188 48.4
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.3e-36 157.1 202 45.5
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 1.3e-36 157.1 173 49.7
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 3.9e-36 155.6 215 45.6
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.5e-35 153.7 223 42.6
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 1.9e-35 153.3 229 42.8
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 2.5e-35 152.9 238 44.1
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 2.5e-35 152.9 189 47.1
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.3e-35 152.5 195 45.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.3e-35 152.5 201 47.3
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 5.6e-35 151.8 200 43.0
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 7.4e-35 151.4 183 44.3
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 9.6e-35 151.0 225 42.7
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.3e-34 150.6 215 41.9
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.6e-34 150.2 200 44.0
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.6e-34 150.2 215 43.7
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 2.1e-34 149.8 200 44.0
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 6.2e-34 148.3 214 43.9
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 6.2e-34 148.3 201 43.3
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.4e-33 146.4 200 43.5
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.4e-33 146.4 200 43.5
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.4e-33 146.4 200 43.5
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 3.1e-33 146.0 226 42.9
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 9.0e-33 144.4 144 52.8
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 9.0e-33 144.4 207 43.5
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 2.0e-32 143.3 269 36.4
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 3.4e-32 142.5 204 43.1
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 4.5e-32 142.1 226 41.2
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 5.8e-32 141.7 145 52.4
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 9.9e-32 141.0 211 44.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.9e-30 136.7 153 50.3
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 2.5e-30 136.3 160 49.4
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 4.2e-30 135.6 196 43.4
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 7.1e-30 134.8 194 46.4
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 9.3e-30 134.4 218 38.5
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 9.3e-30 134.4 147 47.6
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 9.3e-30 134.4 176 45.5
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.6e-29 133.7 147 49.7
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 6.0e-29 131.7 183 44.3
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.3e-28 130.6 172 45.3
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 1.8e-28 130.2 164 47.6
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 5.1e-28 128.6 128 53.9
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 8.2e-26 121.3 165 45.5
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.4e-25 120.6 216 41.2
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.2e-24 117.5 234 38.9
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 4.9e-23 112.1 224 38.4
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.1e-22 110.9 200 39.0
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.2e-21 107.5 193 38.9
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 2.3e-20 103.2 193 41.5
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.9e-20 102.4 234 36.8
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 7.2e-14 81.6 169 33.7
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 1.6e-13 80.5 135 38.5
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.5e-11 73.2 217 31.3
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 1.3e-10 70.9 78 50.0
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.7e-10 69.3 182 32.4
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 2.0e-08 63.5 65 49.2
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 8.5e-07 58.2 176 28.4


User provided reference genes

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