Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000267g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 5.9e-118 427.6 216 100.0
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.8e-103 379.4 215 89.8
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.4e-103 379.0 215 90.2
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 4.1e-103 378.3 215 90.7
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.2e-99 366.7 214 89.3
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 9.8e-89 330.5 218 78.9
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 9.4e-84 313.9 218 77.1
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 1.6e-83 313.2 218 77.1
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 5.6e-76 288.1 218 72.0
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 2.1e-30 136.7 219 39.3
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 4.3e-28 129.0 254 34.6
Oeu002905.1 Olea europaea HOM05D002890 ORTHO05D005855 7.4e-28 128.3 194 44.3
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 2.4e-26 123.2 248 36.7
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 7.6e-25 118.2 218 37.2
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 1.4e-23 114.0 228 37.3
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 3.2e-23 112.8 249 34.9
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 9.3e-23 111.3 238 34.0
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 1.0e-21 107.8 242 34.7
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 1.8e-21 107.1 256 34.8
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 3.9e-21 105.9 200 36.0
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 3.9e-21 105.9 228 36.0
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 8.7e-21 104.8 242 33.9
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 8.7e-21 104.8 260 33.8
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 1.6e-19 100.5 236 35.6
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 2.1e-19 100.1 225 36.4
Atru.chr10.2228 Acer truncatum HOM05D002890 ORTHO05D005855 2.8e-19 99.8 234 33.8
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 4.8e-19 99.0 242 33.1
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 4.8e-19 99.0 174 38.5
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 1.8e-18 97.1 155 40.0
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 1.8e-18 97.1 150 40.0
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 4.0e-18 95.9 175 37.7
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 5.3e-18 95.5 185 38.4
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 2.0e-17 93.6 247 32.8
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 2.0e-17 93.6 197 34.5
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 2.0e-17 93.6 226 34.1
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 3.4e-17 92.8 249 34.9
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 4.5e-17 92.4 155 39.4
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 5.8e-17 92.0 187 34.8
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 5.8e-17 92.0 179 35.2
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 5.8e-17 92.0 185 35.1
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 5.8e-17 92.0 202 36.1
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 1.0e-16 91.3 250 32.4
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 1.3e-16 90.9 233 32.6
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 1.3e-16 90.9 191 35.6
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.3e-16 90.9 184 37.0
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 2.2e-16 90.1 222 35.1
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 2.2e-16 90.1 239 33.5
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 2.9e-16 89.7 135 39.3
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 3.8e-16 89.4 216 33.3
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 6.5e-16 88.6 235 34.9
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 6.5e-16 88.6 232 31.9
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 1.1e-15 87.8 144 36.8
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 1.4e-15 87.4 243 32.1
MD05G1347100 Malus domestica HOM05D002890 ORTHO05D005855 1.9e-15 87.0 223 34.1
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 4.2e-15 85.9 222 34.7
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 4.2e-15 85.9 259 30.9
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 4.2e-15 85.9 259 30.9
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 5.5e-15 85.5 137 43.1
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 9.3e-15 84.7 133 38.3
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 9.3e-15 84.7 198 31.8
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 9.3e-15 84.7 160 40.0
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 1.2e-14 84.3 154 35.1
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 1.2e-14 84.3 162 35.8
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 1.6e-14 84.0 165 39.4
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 1.6e-14 84.0 169 34.9
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 2.1e-14 83.6 258 27.9
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 2.7e-14 83.2 180 33.9
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 4.6e-14 82.4 153 41.8
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 7.9e-14 81.6 189 32.3
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 1.0e-13 81.3 182 32.4
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 1.0e-13 81.3 169 34.3
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 1.3e-13 80.9 120 43.3
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 3.9e-13 79.3 136 37.5
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 5.1e-13 79.0 151 37.1
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 8.7e-13 78.2 146 38.4
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 1.1e-12 77.8 195 30.8
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 1.1e-12 77.8 185 33.0
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 1.5e-12 77.4 171 31.6
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 1.5e-12 77.4 182 34.1
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 4.3e-12 75.9 230 28.7
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 1.3e-11 74.3 141 38.3
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 1.3e-11 74.3 179 34.1
BcaC04g22582 Brassica carinata HOM05D002890 ORTHO05D005855 3.7e-11 72.8 145 37.2
QL05p073148 Quercus lobata HOM05D002890 ORTHO05D005855 3.7e-11 72.8 220 28.6
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 6.3e-11 72.0 239 29.7
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 6.3e-11 72.0 188 33.0
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 8.2e-11 71.6 217 30.0
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 8.2e-11 71.6 184 32.6
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 1.1e-10 71.2 239 31.0
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 1.1e-10 71.2 234 29.1
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 1.1e-10 71.2 161 32.3
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 1.4e-10 70.9 134 38.1
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 1.4e-10 70.9 134 38.1
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 1.4e-10 70.9 134 38.1
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 1.4e-10 70.9 134 38.1
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 1.4e-10 70.9 186 30.1
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 1.4e-10 70.9 243 28.0
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 1.8e-10 70.5 179 32.4
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 1.8e-10 70.5 172 32.6
SEGI_38151 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 1.8e-10 70.5 172 32.6
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 2.4e-10 70.1 138 38.4
HPP92_025077 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.4e-10 70.1 151 39.7
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 2.6e-09 66.6 163 28.8
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.6e-09 66.6 185 35.1
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 3.4e-09 66.2 140 37.9
Potri.004G015034 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.0e-08 64.7 145 33.8
SHI02204 Sapria himalayana HOM05D002890 ORTHO05D005855 1.0e-08 64.7 146 37.0
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 2.2e-08 63.5 191 34.0
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 6.5e-08 62.0 235 27.7
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 8.5e-08 61.6 242 27.3
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 1.1e-07 61.2 139 35.3
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 4.2e-07 59.3 210 29.5


User provided reference genes

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