Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-88 330.1 169 100.0
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.7e-41 171.0 145 58.6
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-37 160.6 145 56.6
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.3e-35 151.4 145 52.4
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-34 148.7 140 55.0
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-32 143.7 139 52.5
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-32 143.7 125 60.0
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-28 130.6 142 52.1
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.4e-28 129.0 125 54.4
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.2e-26 120.9 99 53.5
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-25 120.2 148 46.6
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.7e-25 119.4 138 44.9
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.9e-24 115.5 91 65.9
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.3e-23 111.3 122 51.6
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.2e-22 110.5 96 58.3
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.0e-22 107.8 113 53.1
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-21 107.5 97 56.7
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-21 105.1 91 52.7
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-19 100.1 99 54.5
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-18 97.1 87 56.3
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 5.4e-18 95.1 77 62.3
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.2e-17 94.0 122 44.3
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 3.5e-17 92.4 99 46.5
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.6e-17 92.0 72 68.1
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.6e-17 92.0 88 55.7
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.0e-17 91.7 74 63.5
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 1.0e-16 90.9 74 62.2
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.3e-16 90.5 76 59.2
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-16 89.7 81 59.3
Nitab4.5_0000780g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.3e-15 85.9 76 63.2
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-14 83.2 87 47.1
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 2.6e-12 76.3 83 49.4
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-12 75.5 140 31.4
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 9.9e-12 74.3 56 69.6
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-11 73.2 97 40.2
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.9e-11 72.8 57 63.2
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.7e-11 72.4 67 56.7
Nitab4.5_0001238g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-11 72.0 62 58.1
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-10 70.9 85 41.2
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.1e-10 70.9 76 47.4
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 3.2e-10 69.3 117 39.3
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-10 68.9 96 37.5
Sopen02g012250 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-10 68.6 57 61.4
Nitab4.5_0000132g0210 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.1e-10 68.2 54 61.1
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.2e-10 67.8 72 43.1
Peaxi162Scf00004g00093 Petunia axillaris HOM05D007931 ORTHO05D010331 1.2e-09 67.4 76 53.9
Nitab4.5_0003032g0060 Nicotiana tabacum HOM05D007931 ORTHO05D014660 1.6e-09 67.0 69 49.3
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 1.0e-08 64.3 97 40.2
Sopen08g021590 Solanum pennellii HOM05D007931 ORTHO05D010331 1.0e-08 64.3 73 46.6
Nitab4.5_0000055g0280 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-08 63.5 58 56.9
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-08 63.5 82 37.8
Nitab4.5_0005292g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.6e-08 61.2 64 51.6
Nitab4.5_0010978g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.3e-07 59.3 62 48.4
Nitab4.5_0000515g0140 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.6e-07 58.5 51 60.8
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.3e-07 58.2 77 37.7
Nitab4.5_0000139g0190 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-06 55.5 70 40.0
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 6.2e-06 55.1 74 41.9


User provided reference genes

Program Settings