Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.3e-76 288.9 155 100.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.2e-69 266.5 155 92.3
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 8.1e-53 210.7 155 77.4
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 3.4e-51 205.3 157 76.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.1e-46 190.3 119 86.6
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.3e-42 176.8 155 69.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.6e-37 158.7 151 67.5
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.6e-37 158.7 151 67.5
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.1e-37 157.5 157 65.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 5.3e-36 154.8 152 65.8
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.9e-36 154.5 142 69.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.2e-35 153.7 154 61.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.4e-35 152.1 152 63.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 5.8e-35 151.4 146 65.8
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 9.9e-35 150.6 150 64.7
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.7e-34 149.8 152 62.5
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.8e-34 148.7 153 64.7
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 8.4e-34 147.5 147 63.3
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 8.4e-34 147.5 151 65.6
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.1e-33 147.1 148 64.9
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.1e-33 147.1 148 65.5
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.1e-33 147.1 153 61.4
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.9e-33 146.4 151 64.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 2.4e-33 146.0 148 63.5
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 2.4e-33 146.0 148 63.5
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 3.2e-33 145.6 148 63.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 3.2e-33 145.6 102 80.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 5.4e-33 144.8 153 62.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 7.1e-33 144.4 104 79.8
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 7.1e-33 144.4 104 79.8
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 9.3e-33 144.1 99 65.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 9.3e-33 144.1 122 68.9
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 9.3e-33 144.1 145 62.1
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 9.3e-33 144.1 143 62.2
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 9.3e-33 144.1 99 80.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.2e-32 143.7 146 62.3
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.2e-32 143.7 145 63.4
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.6e-32 143.3 157 59.9
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.1e-32 142.9 156 57.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.1e-32 142.9 103 80.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.1e-32 142.9 148 63.5
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 2.7e-32 142.5 148 62.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 2.7e-32 142.5 148 62.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.5e-32 142.1 146 61.0
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.5e-32 142.1 99 85.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.5e-32 142.1 145 64.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.5e-32 142.1 148 61.5
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 4.6e-32 141.7 147 64.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.6e-32 141.7 151 61.6
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 4.6e-32 141.7 144 62.5
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 6.0e-32 141.4 147 60.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.0e-32 141.4 104 78.8
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 7.9e-32 141.0 144 62.5
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 7.9e-32 141.0 161 57.1
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 7.9e-32 141.0 153 60.1
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 7.9e-32 141.0 100 83.0
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.0e-31 140.6 105 75.2
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.0e-31 140.6 146 62.3
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.0e-31 140.6 154 57.1
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.8e-31 139.8 138 61.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 5.1e-31 138.3 119 69.7
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.1e-30 137.1 143 60.1
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.1e-30 137.1 149 60.4
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.5e-30 136.7 118 64.4
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.9e-30 136.3 144 63.2
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.5e-30 136.0 107 73.8
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.5e-30 136.0 99 80.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 2.5e-30 136.0 104 76.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.3e-30 135.6 147 60.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 3.3e-30 135.6 124 67.7
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 5.6e-30 134.8 145 59.3
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 7.4e-30 134.4 122 69.7
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 7.4e-30 134.4 136 61.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 9.6e-30 134.0 96 78.1
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 9.6e-30 134.0 105 74.3
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.3e-29 133.7 135 59.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.8e-29 132.5 128 57.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.8e-29 132.5 82 87.8
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 8.1e-29 131.0 112 71.4
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 8.1e-29 131.0 105 73.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 8.1e-29 131.0 100 78.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.4e-28 130.2 103 71.8
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.4e-28 130.2 103 71.8
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.4e-28 130.2 119 65.5
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.8e-28 129.8 99 76.8
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 6.9e-28 127.9 95 74.7
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 6.9e-28 127.9 122 63.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.9e-28 127.9 137 57.7
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 6.9e-28 127.9 99 75.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 6.9e-28 127.9 91 79.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 6.9e-28 127.9 102 74.5
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.2e-27 127.1 135 62.2
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 3.4e-27 125.6 98 73.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.7e-26 123.2 98 73.5
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.2e-25 119.0 135 60.7
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.2e-25 119.0 93 57.0
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.2e-24 117.1 97 71.1
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 1.6e-24 116.7 92 71.7
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 7.9e-24 114.4 89 76.4
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 7.9e-24 114.4 94 68.1
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.3e-22 108.6 77 81.8
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 9.6e-22 107.5 106 58.5
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 9.6e-22 107.5 83 71.1
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 8.2e-21 104.4 73 82.2
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.1e-12 75.9 93 48.4


User provided reference genes

Program Settings