Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000261g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.3e-30 132.9 67 100.0
Nitab4.5_0010005g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-19 99.4 72 65.3
Nitab4.5_0000651g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-19 99.0 72 66.7
Nitab4.5_0000024g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.3e-19 97.4 72 63.9
Nitab4.5_0001021g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.4e-19 96.7 72 63.9
Nitab4.5_0002306g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.6e-19 96.3 72 65.3
Nitab4.5_0000173g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.3e-18 95.9 72 63.9
Nitab4.5_0003667g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-18 95.5 72 63.9
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-18 94.4 72 63.9
Nitab4.5_0000786g0260 Nicotiana tabacum HOM05D001454 ORTHO05D006296 3.6e-18 94.4 71 66.2
Nitab4.5_0002874g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-18 94.4 72 62.5
Nitab4.5_0000051g0170 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.2e-18 93.6 70 62.9
Nitab4.5_0000365g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.2e-18 93.6 72 65.3
Nitab4.5_0001322g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.2e-18 93.6 71 64.8
Nitab4.5_0002002g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-17 92.8 71 60.6
Nitab4.5_0000002g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-17 92.4 72 65.3
Nitab4.5_0003985g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.8e-17 92.0 72 65.3
Nitab4.5_0000011g0240 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.1e-17 91.3 72 62.5
Nitab4.5_0000036g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.1e-17 91.3 67 67.2
Nitab4.5_0001637g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.0e-17 89.7 68 64.7
Nitab4.5_0000087g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-16 89.0 68 61.8
Nitab4.5_0000498g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-16 89.0 72 62.5
Nitab4.5_0000555g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-16 89.0 72 59.7
Nitab4.5_0000732g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.0e-16 88.6 72 56.9
Nitab4.5_0000001g0450 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-16 88.2 68 63.2
Nitab4.5_0000054g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-16 88.2 67 71.6
Nitab4.5_0000183g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-16 88.2 72 58.3
Nitab4.5_0001575g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-16 88.2 72 58.3
Nitab4.5_0006913g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-16 88.2 71 64.8
Nitab4.5_0000593g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.4e-16 87.8 68 63.2
Nitab4.5_0001010g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.9e-16 86.3 70 60.0
Peaxi162Scf00124g00002 Petunia axillaris HOM05D001426 ORTHO05D001389 9.9e-16 86.3 71 57.7
Nitab4.5_0000266g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.3e-15 85.9 72 59.7
Nitab4.5_0001125g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-15 85.5 72 56.9
Nitab4.5_0000171g0370 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.2e-15 85.1 72 61.1
Nitab4.5_0000734g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-15 84.7 72 61.1
Nitab4.5_0000114g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.8e-15 84.3 72 56.9
Nitab4.5_0004562g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.8e-15 84.3 61 68.9
Nitab4.5_0000268g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.9e-15 84.0 71 56.3
Nitab4.5_0000014g0520 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.4e-15 83.6 72 56.9
Nitab4.5_0000304g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.4e-15 83.6 72 55.6
Nitab4.5_0005427g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.4e-15 83.6 64 65.6
Nitab4.5_0000038g0410 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.4e-15 83.2 72 56.9
Nitab4.5_0000084g0250 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.4e-15 83.2 62 62.9
Nitab4.5_0000464g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.4e-15 83.2 64 62.5
Nitab4.5_0000340g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-14 82.8 63 66.7
Nitab4.5_0000905g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-14 82.4 66 62.1
Nitab4.5_0006044g0010 Nicotiana tabacum HOM05D001426 ORTHO05D030280 1.9e-14 82.0 61 65.6
Nitab4.5_0022807g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-14 82.0 62 66.1
Nitab4.5_0000247g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.4e-14 81.6 71 57.7
Nitab4.5_0000458g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.2e-14 81.3 72 54.2
Nitab4.5_0000077g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.2e-14 80.9 72 54.2
Nitab4.5_0000278g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.2e-14 80.9 64 60.9
Nitab4.5_0000026g0390 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.5e-14 80.5 69 60.9
Nitab4.5_0002654g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.3e-14 79.7 70 54.3
Nitab4.5_0000405g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-13 79.3 72 55.6
Nitab4.5_0003465g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-13 79.3 61 62.3
Nitab4.5_0004533g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-13 79.3 72 59.7
Nitab4.5_0000311g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-13 79.0 72 52.8
Nitab4.5_0008537g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-13 79.0 64 60.9
Nitab4.5_0000153g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-13 78.6 72 54.2
Nitab4.5_0002420g0020 Nicotiana tabacum HOM05D001454 ORTHO05D001389 2.1e-13 78.6 60 66.7
Nitab4.5_0000042g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-13 78.2 71 50.7
Nitab4.5_0000044g0480 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-13 78.2 64 59.4
Nitab4.5_0000168g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.5e-13 77.8 56 75.0
Nitab4.5_0000050g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.6e-13 77.4 61 63.9
Nitab4.5_0000453g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.6e-13 77.4 63 58.7
Nitab4.5_0001883g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.6e-13 77.4 64 57.8
Nitab4.5_0000957g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.0e-13 77.0 67 53.7
Peaxi162Scf00204g01615 Petunia axillaris HOM05D001426 ORTHO05D001389 7.9e-13 76.6 72 52.8
Nitab4.5_0001269g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-12 76.3 66 60.6
Nitab4.5_0000210g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.8e-12 75.5 67 56.7
Nitab4.5_0003679g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-12 75.1 72 51.4
Nitab4.5_0000200g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.0e-12 74.7 66 57.6
Nitab4.5_0021692g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.9e-12 74.3 61 60.7
Nitab4.5_0000107g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-12 73.9 69 53.6
Nitab4.5_0002167g0140 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-12 73.9 67 58.2
Nitab4.5_0008049g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-12 73.9 71 52.1
Nitab4.5_0000854g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.7e-12 73.6 61 59.0
Nitab4.5_0002316g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.7e-12 73.6 65 53.8
Nitab4.5_0000318g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.7e-12 73.2 56 60.7
Nitab4.5_0004145g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-11 72.0 66 60.6
Nitab4.5_0000530g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.3e-11 70.9 72 54.2
Nitab4.5_0002728g0170 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.6e-11 70.5 67 52.2
Nitab4.5_0000163g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.6e-11 69.7 66 54.5
Nitab4.5_0000124g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-10 68.6 67 58.2
Nitab4.5_0000314g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-10 68.6 69 44.9
Nitab4.5_0000282g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.8e-10 67.4 61 55.7
Nitab4.5_0001530g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.8e-10 67.4 60 55.0
Nitab4.5_0000048g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.2e-10 66.6 56 53.6
Nitab4.5_0000211g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-09 66.2 66 56.1
Nitab4.5_0000324g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-09 66.2 36 94.4
Nitab4.5_0000743g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-09 66.2 61 50.8
Nitab4.5_0007283g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-09 66.2 67 53.7
Peaxi162Scf00241g00148 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-09 66.2 62 53.2
Nitab4.5_0015022g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-09 65.9 51 60.8
Nitab4.5_0000522g0160 Nicotiana tabacum HOM05D001454 ORTHO05D006296 1.8e-09 65.5 59 54.2
Nitab4.5_0000328g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.4e-09 65.1 66 53.0
Nitab4.5_0000597g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.0e-09 64.3 64 54.7
Nitab4.5_0004145g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.0e-09 64.3 54 63.0
Nitab4.5_0000061g0240 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.3e-09 63.9 61 49.2
Nitab4.5_0000395g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.3e-09 63.9 67 55.2
Nitab4.5_0001547g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.3e-09 63.9 64 56.2
Nitab4.5_0004145g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.3e-09 63.9 54 57.4
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 6.9e-09 63.5 68 48.5
Nitab4.5_0000018g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-08 62.8 48 66.7
Nitab4.5_0000067g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-08 62.8 67 50.7
Nitab4.5_0006913g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-08 62.4 63 49.2
Nitab4.5_0000228g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.0e-08 62.0 61 47.5
Nitab4.5_0000234g0290 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-08 61.6 66 51.5
Nitab4.5_0000762g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.4e-08 61.2 57 59.6
Nitab4.5_0000153g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.8e-08 60.5 55 50.9
Nitab4.5_0000118g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.6e-08 60.1 53 58.5
Nitab4.5_0000140g0100 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.3e-07 59.3 36 77.8
Nitab4.5_0000155g0170 Nicotiana tabacum HOM05D001454 ORTHO05D006296 1.3e-07 59.3 35 80.0
Nitab4.5_0000463g0040 Nicotiana tabacum HOM05D001454 ORTHO05D006296 1.3e-07 59.3 52 57.7
Peaxi162Scf00327g00054 Petunia axillaris HOM05D001426 ORTHO05D001389 1.3e-07 59.3 65 46.2
Nitab4.5_0002084g0010 Nicotiana tabacum HOM05D001426 ORTHO05D286235 1.7e-07 58.9 36 72.2
Nitab4.5_0003222g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-07 58.9 50 54.0
Nitab4.5_0004358g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 1.7e-07 58.9 34 76.5
Nitab4.5_0000582g0170 Nicotiana tabacum HOM05D001426 ORTHO05D006296 2.2e-07 58.5 35 82.9
Nitab4.5_0000118g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-07 58.2 64 50.0
Nitab4.5_0010180g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-07 58.2 55 47.3
Nitab4.5_0000004g0290 Nicotiana tabacum HOM05D001426 ORTHO05D285067 3.8e-07 57.8 35 77.1
Nitab4.5_0000262g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.8e-07 57.8 66 45.5
Nitab4.5_0001206g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.8e-07 57.8 53 60.4
Nitab4.5_0000013g0420 Nicotiana tabacum HOM05D001426 ORTHO05D006296 4.9e-07 57.4 58 55.2
Nitab4.5_0001351g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.5e-07 57.0 53 52.8
Nitab4.5_0002542g0010 Nicotiana tabacum HOM05D001426 ORTHO05D006296 6.5e-07 57.0 58 48.3
Nitab4.5_0000201g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.4e-07 56.6 48 56.2
Nitab4.5_0001771g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.4e-07 56.6 61 45.9
Nitab4.5_0000007g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-06 56.2 60 51.7
Solyc00g230060.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 1.4e-06 55.8 56 51.8
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-06 55.5 61 44.3
Nitab4.5_0000904g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.5e-06 55.1 72 47.2
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.2e-06 54.3 64 45.3
CAN.G229.11 Capsicum annuum HOM05D001426 ORTHO05D001389 5.5e-06 53.9 54 55.6
Nitab4.5_0000033g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.5e-06 53.9 55 45.5
Nitab4.5_0004002g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.5e-06 53.9 35 62.9
Nitab4.5_0004348g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.5e-06 53.9 35 65.7
PGSC0003DMG400016975 Solanum tuberosum HOM05D001426 ORTHO05D001389 5.5e-06 53.9 53 52.8
Nitab4.5_0000002g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.1e-06 53.5 52 51.9
Nitab4.5_0001116g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.1e-06 53.5 46 58.7
Nitab4.5_0028679g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.1e-06 53.5 46 58.7
Nitab4.5_0000063g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.3e-06 53.1 39 66.7


User provided reference genes

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