Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.8e-157 557.4 298 100.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 9.5e-151 537.0 298 96.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.0e-128 462.2 302 84.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.6e-126 456.4 300 84.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 2.1e-102 376.3 314 72.3
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.9e-88 328.9 300 64.3
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 9.0e-85 317.8 304 60.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.5e-84 317.0 228 73.7
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 5.9e-84 315.1 304 59.9
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-82 310.5 298 61.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.2e-82 309.3 296 59.5
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.7e-81 306.2 311 57.6
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.7e-81 306.2 304 60.2
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 7.9e-81 304.7 216 71.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 7.9e-81 304.7 290 58.3
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.3e-80 303.1 298 60.1
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.7e-80 301.6 300 58.3
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.5e-79 299.7 263 63.1
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.5e-79 299.7 301 58.5
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 3.3e-79 299.3 218 70.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.3e-79 299.3 303 58.4
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 5.7e-79 298.5 291 58.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 7.4e-79 298.1 243 65.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.3e-78 297.4 292 57.2
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 6.3e-78 295.0 311 57.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.3e-78 295.0 228 72.8
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.1e-77 294.3 302 57.9
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.1e-77 294.3 300 58.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.1e-77 292.4 218 69.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 5.3e-77 292.0 215 70.7
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 6.9e-77 291.6 308 55.2
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 9.0e-77 291.2 270 60.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.5e-76 290.4 235 66.0
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.5e-76 290.4 240 65.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.5e-76 290.4 305 55.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.0e-76 290.0 300 56.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.6e-76 289.7 224 67.9
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 3.4e-76 289.3 300 56.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 4.5e-76 288.9 299 56.5
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 4.5e-76 288.9 270 60.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 7.7e-76 288.1 299 56.9
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 7.7e-76 288.1 226 67.7
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.0e-75 287.7 272 59.6
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.7e-75 287.0 301 56.1
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 3.8e-75 285.8 301 56.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 3.8e-75 285.8 268 59.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 5.0e-75 285.4 305 55.1
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.4e-74 283.9 303 56.1
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.4e-74 283.9 219 67.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 3.2e-74 282.7 285 57.5
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 7.2e-74 281.6 226 67.3
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.2e-73 280.8 244 61.9
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.6e-73 279.3 304 55.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.6e-73 278.9 302 55.0
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 4.6e-73 278.9 259 58.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.0e-72 276.2 274 56.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.0e-72 276.2 193 73.1
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.1e-72 275.4 226 66.4
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 5.1e-72 275.4 216 65.7
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.7e-72 275.0 254 61.8
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.0e-71 273.5 323 52.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.7e-71 271.9 254 61.8
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 7.4e-71 271.6 285 56.8
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.3e-70 270.8 270 60.0
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 9.1e-69 264.6 308 53.2
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.5e-68 263.8 308 53.2
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 7.7e-68 261.5 267 56.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 2.9e-67 259.6 175 74.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-66 257.7 301 53.2
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.9e-66 256.9 193 68.4
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.5e-66 256.5 217 62.7
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.2e-66 255.8 260 60.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 4.2e-66 255.8 326 50.3
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 5.5e-66 255.4 301 52.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 9.4e-66 254.6 308 52.3
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.1e-65 253.4 392 45.9
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.7e-65 253.1 272 58.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.8e-64 250.4 265 58.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 8.8e-64 248.1 199 63.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-63 247.7 301 52.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.1e-63 247.7 291 53.3
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.0e-63 246.9 238 57.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.6e-63 246.5 189 68.3
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.3e-62 244.2 211 61.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.7e-62 243.8 288 53.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 6.3e-62 241.9 295 52.5
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 8.2e-62 241.5 288 52.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.1e-61 239.6 218 56.4
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.0e-60 236.9 268 52.6
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-59 234.2 289 49.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.2e-59 233.4 199 60.3
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.8e-59 232.6 224 57.6
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.5e-59 231.5 289 49.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.9e-58 230.3 261 54.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.9e-58 230.3 215 61.4
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-56 224.2 184 67.4
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.8e-56 223.8 229 60.3
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 9.7e-55 218.0 205 59.0
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.1e-49 198.7 194 61.3
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.4e-47 193.0 266 48.9
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.7e-47 192.2 136 69.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.5e-47 191.8 150 66.0
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 4.5e-44 182.6 212 51.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 4.2e-42 176.0 197 46.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.8e-40 170.6 144 61.1
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 6.8e-40 168.7 286 46.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.4e-37 160.2 177 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.1e-37 159.8 143 58.0
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 9.2e-37 158.3 194 54.1
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.7e-35 154.1 269 43.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.3e-35 153.7 192 52.1
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 8.0e-33 145.2 102 71.6
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.8e-29 134.0 116 59.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.1e-26 124.8 187 42.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 2.1e-25 120.6 126 54.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.3e-22 111.3 70 88.6
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 4.6e-20 102.8 178 33.1
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 7.3e-18 95.5 190 33.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.2e-16 89.4 79 59.5
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.7e-12 77.0 90 51.1
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 6.6e-11 72.4 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.2e-06 57.4 42 71.4


User provided reference genes

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