Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000259g0170 Nicotiana tabacum HOM05D007623 ORTHO05D009641 2.3e-90 337.4 625 100.0
Nitab4.5_0011373g0020 Nicotiana tabacum HOM05D007623 ORTHO05D009641 7.2e-84 315.8 625 96.5
Peaxi162Scf00188g01015 Petunia axillaris HOM05D007623 ORTHO05D009641 2.2e-48 198.0 120 79.2
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 3.9e-45 187.2 118 78.0
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 9.5e-44 182.6 122 73.8
Dinv34009 Davidia involucrata HOM05D007623 ORTHO05D009641 3.7e-40 170.6 119 72.3
CSS0034887 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 4.9e-40 170.2 119 71.4
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 4.9e-40 170.2 124 69.4
Lj6A773T130 Lonicera japonica HOM05D007623 ORTHO05D009641 6.6e-37 159.8 125 68.0
GSVIVG01010112001 Vitis vinifera HOM05D007623 ORTHO05D009641 1.1e-36 159.1 119 67.2
Actinidia24041 Actinidia chinensis HOM05D007623 ORTHO05D009641 1.9e-36 158.3 124 66.1
Actinidia31923 Actinidia chinensis HOM05D007623 ORTHO05D009641 1.9e-36 158.3 119 67.2
Manes.14G091100 Manihot esculenta HOM05D007623 ORTHO05D009641 2.1e-35 154.8 124 62.9
vmacro01293 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 2.1e-35 154.8 119 68.1
TAR374G0443 Trochodendron aralioides HOM05D007623 ORTHO05D009641 2.8e-35 154.5 125 60.0
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 1.8e-34 151.8 119 63.9
Nitab4.5_0002309g0180 Nicotiana tabacum HOM05D007623 ORTHO05D009641 2.3e-34 151.4 76 94.7
Thecc.02G321100 Theobroma cacao HOM05D007623 ORTHO05D009641 2.6e-33 147.9 119 60.5
COL.COLO4_27779 Corchorus olitorius HOM05D007623 ORTHO05D009641 5.8e-33 146.7 124 58.9
RcHm_v2.0_Chr4g0437181 Rosa chinensis HOM05D007623 ORTHO05D009641 5.8e-33 146.7 125 57.6
Atru.chr11.1545 Acer truncatum HOM05D007623 ORTHO05D009641 7.5e-33 146.4 124 59.7
FAN22G0497 Fragaria x ananassa HOM05D007623 ORTHO05D009641 7.5e-33 146.4 119 59.7
FvH4_4g29120 Fragaria vesca HOM05D007623 ORTHO05D009641 9.9e-33 146.0 119 59.7
Aqoxy1G01216 Aquilegia oxysepala HOM05D007623 ORTHO05D009641 1.7e-32 145.2 125 57.6
Cfa008839 Carpinus fangiana HOM05D007623 ORTHO05D009641 1.7e-32 145.2 125 58.4
FAN12G1349 Fragaria x ananassa HOM05D007623 ORTHO05D009641 1.7e-32 145.2 119 58.8
Gohir.A03G106900 Gossypium hirsutum HOM05D007623 ORTHO05D009641 1.7e-32 145.2 117 61.5
Gohir.D02G132000 Gossypium hirsutum HOM05D007623 ORTHO05D009641 1.7e-32 145.2 117 61.5
Gorai.005G147900 Gossypium raimondii HOM05D007623 ORTHO05D009641 1.7e-32 145.2 117 61.5
FAN17G1802 Fragaria x ananassa HOM05D007623 ORTHO05D009641 2.9e-32 144.4 119 58.8
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 2.9e-32 144.4 124 59.7
Ciclev10031004m.g Citrus clementina HOM05D007623 ORTHO05D009641 1.1e-31 142.5 124 55.6
Hund25149 Selenicereus undatus HOM05D007623 ORTHO05D009641 1.1e-31 142.5 124 56.5
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 1.9e-31 141.7 125 58.4
Haze_11851 Corylus avellana HOM05D007623 ORTHO05D009641 3.2e-31 141.0 125 56.0
Prupe.2G062100 Prunus persica HOM05D007623 ORTHO05D009641 5.4e-31 140.2 119 57.1
MD16G1054700 Malus domestica HOM05D007623 ORTHO05D009641 2.1e-30 138.3 115 60.0
HanXRQChr08g0215011 Helianthus annuus HOM05D007623 ORTHO05D009641 6.0e-30 136.7 125 58.4
MELO3C026661.2 Cucumis melo HOM05D007623 ORTHO05D009641 1.0e-29 136.0 119 57.1
CiPaw.06G095500 Carya illinoinensis HOM05D007623 ORTHO05D009641 2.3e-29 134.8 125 52.0
Sed0026487 Sechium edule HOM05D007623 ORTHO05D009641 5.1e-29 133.7 125 53.6
Lsat_1_v5_gn_6_31920 Lactuca sativa HOM05D007623 ORTHO05D009641 6.6e-29 133.3 124 54.0
CsaV3_3G030580 Cucumis sativus L. HOM05D007623 ORTHO05D009641 4.3e-28 130.6 119 54.6
ClCG05G023480 Citrullus lanatus HOM05D007623 ORTHO05D009641 7.3e-28 129.8 125 54.4
CAN.G680.12 Capsicum annuum HOM05D007623 ORTHO05D009641 1.1e-26 125.9 85 75.3
Nn1g03057 Nelumbo nucifera HOM05D007623 ORTHO05D009641 1.4e-26 125.6 131 49.6
MD13G1055600 Malus domestica HOM05D007623 ORTHO05D009641 1.8e-26 125.2 111 56.8
DCAR_023738 Daucus carota HOM05D007623 ORTHO05D009641 3.1e-26 124.4 124 52.4
AL1G25410 Arabidopsis lyrata HOM05D007623 ORTHO05D009641 7.6e-25 119.8 119 48.7
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 1.3e-24 119.0 125 46.4
SHI04831 Sapria himalayana HOM05D007623 ORTHO05D009641 1.1e-23 115.9 109 49.5
Sc11g0002680 Simmondsia chinensis HOM05D007623 ORTHO05D009641 2.4e-23 114.8 96 56.2
Zm00001eb045730 Zea mays HOM05D007623 ORTHO05D009641 3.2e-23 114.4 118 49.2
CARHR013990 Cardamine hirsuta HOM05D007623 ORTHO05D009641 4.2e-23 114.0 112 48.2
Oeu019601.2 Olea europaea HOM05D007623 ORTHO05D009641 7.1e-23 113.2 96 60.4
Prupe.7G020300 Prunus persica HOM05D007623 ORTHO05D009641 7.1e-23 113.2 108 50.9
Thhalv10009738m.g Eutrema salsugineum HOM05D007623 ORTHO05D009641 9.3e-23 112.8 119 45.4
EL10Ac6g14659 Beta vulgaris HOM05D007623 ORTHO05D009641 6.0e-22 110.2 95 60.0
BcaB08g34697 Brassica carinata HOM05D007623 ORTHO05D009641 3.9e-21 107.5 129 45.7
Cc11_g11460 Coffea canephora HOM05D007623 ORTHO05D009641 5.1e-21 107.1 96 57.3
AUR62007860 Chenopodium quinoa HOM05D007623 ORTHO05D009641 2.5e-20 104.8 96 57.3
Migut.E00256 Erythranthe guttata HOM05D007623 ORTHO05D009641 4.3e-20 104.0 96 54.2
Rhsim12G0070700 Rhododendron simsii HOM05D007623 ORTHO05D009641 9.6e-20 102.8 80 65.0
AUR62003048 Chenopodium quinoa HOM05D007623 ORTHO05D009641 4.0e-18 97.4 96 54.2
THA.LOC104805220 Tarenaya hassleriana HOM05D007623 ORTHO05D009641 5.3e-18 97.1 91 44.0
Sp1g12290 Schrenkiella parvula HOM05D007623 ORTHO05D009641 3.4e-17 94.4 97 46.4
HPP92_001379 Vanilla planifolia HOM05D007623 ORTHO05D009641 4.9e-16 90.5 124 40.3
BcaB06g28282 Brassica carinata HOM05D007623 ORTHO05D009641 8.4e-16 89.7 126 41.3
A06p09730 Brassica napus HOM05D007623 ORTHO05D009641 1.1e-15 89.4 97 44.3
BraA06t24162Z Brassica rapa HOM05D007623 ORTHO05D009641 1.1e-15 89.4 97 44.3
Carub.0001s1335 Capsella rubella HOM05D007623 ORTHO05D009641 2.4e-15 88.2 93 45.2
Ah.03g137460 Amaranthus hybridus HOM05D007623 ORTHO05D009641 9.3e-15 86.3 83 54.2
AT1G13630 Arabidopsis thaliana HOM05D007623 ORTHO05D009641 1.2e-14 85.9 93 46.2
BcaC05g25269 Brassica carinata HOM05D007623 ORTHO05D009641 1.2e-14 85.9 94 43.6
C05p11430 Brassica napus HOM05D007623 ORTHO05D009641 1.2e-14 85.9 94 43.6
BolC5t29896H Brassica oleracea HOM05D007623 ORTHO05D009641 1.2e-14 85.9 94 43.6
BcaB02g06459 Brassica carinata HOM05D007623 ORTHO05D009641 1.6e-14 85.5 94 43.6
SGA_v2.0_scaffold287G47196 Striga asiatica HOM05D007623 ORTHO05D009641 3.5e-14 84.3 83 50.6
Solyc05g010780.1 Solanum lycopersicum HOM05D007623 ORTHO05D009641 7.8e-14 83.2 76 64.5
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 2.9e-08 64.7 126 28.6
ATR0048G027 Amborella trichopoda HOM05D007623 ORTHO05D009641 6.4e-08 63.5 77 41.6
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 7.1e-07 60.1 123 29.3
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 7.1e-07 60.1 123 28.5
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 7.1e-07 60.1 124 29.0
TWI60G0064 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 6.0e-06 57.0 118 29.7
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 7.9e-06 56.6 122 30.3


User provided reference genes

Program Settings