Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 3.8e-132 476.1 565 100.0
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.1e-83 315.1 238 77.3
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 2.4e-62 244.2 623 69.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 7.0e-62 242.7 623 69.0
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 2.0e-61 241.1 623 69.0
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 9.2e-54 215.7 623 67.1
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.5e-35 154.5 244 41.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 7.3e-35 152.9 249 41.8
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 1.1e-33 149.1 248 41.9
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 5.8e-32 143.3 242 41.3
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 8.3e-31 139.4 241 43.6
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.4e-30 138.7 246 39.0
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.4e-30 137.9 250 38.4
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 4.1e-30 137.1 249 40.2
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 4.1e-30 137.1 122 63.1
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 5.4e-30 136.7 251 39.8
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 9.2e-30 136.0 214 42.5
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 2.1e-29 134.8 529 63.9
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 6.0e-29 133.3 242 41.7
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 6.0e-29 133.3 242 41.7
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 7.8e-29 132.9 242 40.1
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.0e-28 132.5 243 37.9
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.0e-28 132.5 195 44.1
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 1.3e-28 132.1 245 38.4
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 1.7e-28 131.7 243 40.3
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.3e-28 131.3 189 48.1
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.3e-28 131.3 189 48.1
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 3.9e-28 130.6 188 41.0
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 6.6e-28 129.8 247 39.7
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 1.1e-27 129.0 237 39.2
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 1.9e-27 128.3 188 41.0
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 4.3e-27 127.1 243 39.1
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 4.3e-27 127.1 156 48.1
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.6e-27 126.7 255 38.8
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.2e-26 125.6 244 40.2
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.2e-26 125.6 244 40.2
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 1.6e-26 125.2 210 41.0
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.6e-26 125.2 191 46.1
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.6e-26 125.2 259 38.2
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.1e-26 124.8 284 35.6
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 2.8e-26 124.4 191 42.4
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 3.6e-26 124.0 238 38.7
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 6.2e-26 123.2 248 37.5
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 8.1e-26 122.9 202 43.6
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.1e-25 122.5 247 39.3
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.4e-25 122.1 250 36.4
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.4e-25 122.1 230 39.1
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 1.4e-25 122.1 230 39.1
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 1.8e-25 121.7 160 42.5
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 1.8e-25 121.7 160 46.2
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 4.0e-25 120.6 162 45.7
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 4.0e-25 120.6 243 39.1
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.0e-25 120.6 195 44.1
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 6.8e-25 119.8 160 45.6
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 1.5e-24 118.6 239 37.2
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 2.6e-24 117.9 159 45.9
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 3.4e-24 117.5 243 37.0
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 3.4e-24 117.5 243 37.0
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 4.4e-24 117.1 198 43.9
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 7.6e-24 116.3 155 45.8
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 9.9e-24 115.9 159 44.7
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 1.3e-23 115.5 159 45.3
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-23 115.5 161 44.1
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 1.3e-23 115.5 161 44.1
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.9e-23 114.4 162 46.3
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 2.9e-23 114.4 162 42.6
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 3.8e-23 114.0 159 43.4
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 4.9e-23 113.6 162 44.4
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 4.9e-23 113.6 159 44.0
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 4.9e-23 113.6 159 44.0
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 4.9e-23 113.6 190 37.9
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 4.9e-23 113.6 160 43.8
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 6.4e-23 113.2 159 44.0
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 6.4e-23 113.2 159 44.0
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 6.4e-23 113.2 159 44.0
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 8.4e-23 112.8 160 45.0
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 8.4e-23 112.8 256 36.3
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.4e-22 112.1 244 36.1
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 2.4e-22 111.3 244 36.1
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 2.4e-22 111.3 159 40.9
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 5.4e-22 110.2 275 30.5
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 5.4e-22 110.2 245 35.1
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 7.1e-22 109.8 202 38.1
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 9.2e-22 109.4 202 38.1
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.6e-21 108.6 93 82.8
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 2.1e-21 108.2 196 39.8
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 2.7e-21 107.8 157 41.4
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.5e-21 107.5 92 87.0
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 3.5e-21 107.5 253 34.4
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 4.6e-21 107.1 241 34.4
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 6.0e-21 106.7 92 81.5
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 7.8e-21 106.3 253 34.0
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 1.7e-20 105.1 247 35.6
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.3e-20 104.8 191 36.1
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 5.1e-20 103.6 91 80.2
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 5.1e-20 103.6 92 79.3
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 8.7e-20 102.8 186 36.0
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 1.9e-19 101.7 93 78.5
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.9e-19 101.7 159 40.9
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 3.3e-19 100.9 190 35.8
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 3.3e-19 100.9 184 37.0
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 4.3e-19 100.5 190 38.4
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 9.6e-19 99.4 90 77.8
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 1.2e-18 99.0 125 44.8
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 6.2e-18 96.7 91 83.5
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 1.1e-17 95.9 92 81.5
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 3.1e-17 94.4 180 36.7
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 4.4e-16 90.5 90 74.4
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 1.7e-15 88.6 90 72.2
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.1e-14 85.9 95 75.8
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.9e-14 85.1 85 82.4
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 3.5e-13 80.9 127 37.8
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.7e-12 78.6 127 40.9
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 3.0e-12 77.8 84 51.2
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.8e-09 68.6 127 37.8
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 2.4e-09 68.2 158 35.4
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 2.4e-09 68.2 78 70.5
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 6.4e-07 60.1 74 50.0
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 8.4e-07 59.7 80 72.5
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 8.4e-07 59.7 80 72.5


User provided reference genes

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