Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000257g0010 Nicotiana tabacum HOM05D008903 ORTHO05D011660 0.0e+00 1446.4 725 100.0
Nitab4.5_0002059g0040 Nicotiana tabacum HOM05D008903 ORTHO05D011660 4.5e-178 629.0 400 82.0
Nitab4.5_0001577g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 2.4e-107 394.0 485 50.9
Nitab4.5_0000257g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 5.8e-101 372.9 417 55.9
Peaxi162Scf00828g00022 Petunia axillaris HOM05D008903 ORTHO05D011660 1.4e-99 368.2 489 49.1
Peaxi162Scf01141g00008 Petunia axillaris HOM05D000502 ORTHO05D000356 4.0e-94 350.1 816 35.7
Peaxi162Scf01141g00031 Petunia axillaris HOM05D008903 ORTHO05D011660 1.2e-93 348.6 406 53.2
PGSC0003DMG400044936 Solanum tuberosum HOM05D008903 ORTHO05D019318 1.2e-82 312.0 359 54.6
Peaxi162Scf01141g00035 Petunia axillaris HOM05D008903 ORTHO05D011660 6.2e-79 299.7 429 47.1
Solyc05g006380.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 1.2e-77 295.4 404 46.5
Peaxi162Scf00408g00319 Petunia axillaris HOM05D008903 ORTHO05D011660 1.7e-76 291.6 435 48.3
Solyc05g006290.2 Solanum lycopersicum HOM05D008903 ORTHO05D011660 2.2e-76 291.2 458 42.4
Nitab4.5_0000257g0070 Nicotiana tabacum HOM05D008903 ORTHO05D019318 2.7e-74 284.3 361 50.4
Nitab4.5_0002059g0060 Nicotiana tabacum HOM05D008903 ORTHO05D011660 4.3e-72 276.9 344 53.5
Solyc04g051885.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 6.9e-70 269.6 434 41.7
PGSC0003DMG401016557 Solanum tuberosum HOM05D008903 ORTHO05D011660 7.1e-67 259.6 457 39.8
Nitab4.5_0004310g0030 Nicotiana tabacum HOM05D008903 ORTHO05D011660 8.7e-65 252.7 238 63.0
Peaxi162Scf01141g00032 Petunia axillaris HOM05D008903 ORTHO05D011660 1.5e-53 215.3 412 40.5
Nitab4.5_0001142g0130 Nicotiana tabacum HOM05D008903 ORTHO05D011660 6.2e-47 193.4 238 52.5
PGSC0003DMG400041430 Solanum tuberosum HOM05D008903 ORTHO05D019318 6.5e-44 183.3 181 54.7
Peaxi162Scf00828g00023 Petunia axillaris HOM05D008903 ORTHO05D011660 9.3e-43 179.5 285 42.1
Peaxi162Scf01141g00030 Petunia axillaris HOM05D008903 ORTHO05D019318 5.7e-32 143.7 122 63.9
PGSC0003DMG400043542 Solanum tuberosum HOM05D008903 ORTHO05D011660 2.8e-31 141.4 177 46.9
PGSC0003DMG400039045 Solanum tuberosum HOM05D008903 ORTHO05D019318 3.1e-30 137.9 121 60.3
Nitab4.5_0002059g0070 Nicotiana tabacum HOM05D008903 ORTHO05D011660 4.5e-29 134.0 116 66.4
Nitab4.5_0000257g0110 Nicotiana tabacum HOM05D008903 ORTHO05D011660 1.7e-28 132.1 120 64.2
PGSC0003DMG400039371 Solanum tuberosum HOM05D008903 ORTHO05D019318 9.4e-27 126.3 113 60.2
PGSC0003DMG400015586 Solanum tuberosum HOM05D008903 ORTHO05D011660 1.8e-25 122.1 158 45.6
Solyc05g006300.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 1.5e-24 119.0 160 45.0
Solyc05g006280.1 Solanum lycopersicum HOM05D008903 ORTHO05D011660 1.3e-23 115.9 154 45.5
Sopen04g023230 Solanum pennellii HOM05D008903 ORTHO05D011660 1.7e-23 115.5 140 45.0
Nitab4.5_0005149g0060 Nicotiana tabacum HOM05D008903 ORTHO05D019318 4.8e-23 114.0 85 69.4
Sopen05g002270 Solanum pennellii HOM05D008903 ORTHO05D011660 4.1e-22 110.9 133 48.1
CAN.G438.101 Capsicum annuum HOM05D009966 ORTHO05D012083 1.3e-20 105.9 418 29.7
Nitab4.5_0006071g0070 Nicotiana tabacum HOM05D001477 ORTHO05D001182 2.2e-20 105.1 374 26.7
CAN.G1668.1 Capsicum annuum HOM05D001477 ORTHO05D001182 5.0e-20 104.0 400 27.5
arahy.Tifrunner.gnm1.ann1.RP4NXG Arachis hypogaea HOM05D001477 ORTHO05D001182 1.1e-19 102.8 395 27.8
Nitab4.5_0004848g0100 Nicotiana tabacum HOM05D001477 ORTHO05D001182 1.9e-19 102.1 375 26.7
PGSC0003DMG400041867 Solanum tuberosum HOM05D008903 ORTHO05D019318 2.5e-19 101.7 96 57.3
arahy.Tifrunner.gnm1.ann1.5Y9MTZ Arachis hypogaea HOM05D001477 ORTHO05D001182 3.2e-19 101.3 394 27.4
PGSC0003DMG400029236 Solanum tuberosum HOM05D000502 ORTHO05D000356 3.2e-19 101.3 136 47.8
arahy.Tifrunner.gnm1.ann1.L6A5G2 Arachis hypogaea HOM05D001477 ORTHO05D001182 5.5e-19 100.5 447 25.7
Sopen03g040100 Solanum pennellii HOM05D001477 ORTHO05D001182 7.2e-19 100.1 381 26.5
Nitab4.5_0003716g0030 Nicotiana tabacum HOM05D009966 ORTHO05D012083 9.4e-19 99.8 404 27.7
Solyc03g121290.4 Solanum lycopersicum HOM05D001477 ORTHO05D001182 1.6e-18 99.0 381 26.5
PGSC0003DMG400002600 Solanum tuberosum HOM05D001477 ORTHO05D001182 1.6e-18 99.0 401 26.4
Sabra17G0122500 Salix brachista HOM05D001477 ORTHO05D001182 1.8e-17 95.5 382 28.5
Sabra17G0122700 Salix brachista HOM05D001477 ORTHO05D001182 5.2e-17 94.0 382 28.5
Sabra17G0122000 Salix brachista HOM05D001477 ORTHO05D001182 6.7e-17 93.6 454 25.1
RcHm_v2.0_Chr2g0142131 Rosa chinensis HOM05D001477 ORTHO05D001182 2.0e-16 92.0 398 27.1
PGSC0003DMG400005616 Solanum tuberosum HOM05D009966 ORTHO05D012083 2.6e-16 91.7 255 32.5
CiPaw.01G227900 Carya illinoinensis HOM05D001477 ORTHO05D001182 5.7e-16 90.5 388 24.2
Ciclev10025322m.g Citrus clementina HOM05D001477 ORTHO05D001182 5.7e-16 90.5 380 28.9
PGSC0003DMG402005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 1.3e-15 89.4 161 32.9
Solyc03g119890.4 Solanum lycopersicum HOM05D009966 ORTHO05D012083 3.7e-15 87.8 159 33.3
PGSC0003DMG400005634 Solanum tuberosum HOM05D009966 ORTHO05D012083 3.7e-15 87.8 400 28.0
QL93p1866_0198 Quercus lobata HOM05D001477 ORTHO05D001182 4.8e-15 87.4 391 26.6
Sopen03g038770 Solanum pennellii HOM05D009966 ORTHO05D012083 1.1e-14 86.3 159 32.7
PGSC0003DMG401005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 1.8e-14 85.5 161 32.9
arahy.Tifrunner.gnm1.ann1.6K70C8 Arachis hypogaea HOM05D001477 ORTHO05D001182 1.6e-13 82.4 312 27.2
Nitab4.5_0005050g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 1.6e-13 82.4 139 41.0
arahy.Tifrunner.gnm1.ann1.Q9TM1C Arachis hypogaea HOM05D000862 ORTHO05D000943 2.0e-13 82.0 363 23.7
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 2.0e-13 82.0 371 25.1
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 2.0e-13 82.0 382 26.2
FAN05G3307 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.6e-13 81.6 364 25.5
FAN14G2250 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.6e-13 81.6 403 25.1
CAN.G438.102 Capsicum annuum HOM05D009966 ORTHO05D012083 3.5e-13 81.3 185 33.0
FvH4_6g32840 Fragaria vesca HOM05D001477 ORTHO05D001182 3.5e-13 81.3 406 24.9
arahy.Tifrunner.gnm1.ann1.WE1EI7 Arachis hypogaea HOM05D001477 ORTHO05D001182 7.7e-13 80.1 355 25.4
Nitab4.5_0000257g0030 Nicotiana tabacum HOM05D008903 ORTHO05D011660 1.7e-12 79.0 106 43.4
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 2.2e-12 78.6 406 25.6
Manes.04G135400 Manihot esculenta HOM05D001477 ORTHO05D001182 2.2e-12 78.6 358 25.7
FAN02G0832 Fragaria x ananassa HOM05D000862 ORTHO05D001182 8.5e-12 76.6 370 24.6
FAN02G0884 Fragaria x ananassa HOM05D001477 ORTHO05D001182 8.5e-12 76.6 370 24.6
Lj3g0011959 Lotus japonicus HOM05D001477 ORTHO05D001182 8.5e-12 76.6 361 23.8
arahy.Tifrunner.gnm1.ann1.WE7T8M Arachis hypogaea HOM05D000862 ORTHO05D000943 1.1e-11 76.3 363 23.1
Ca_01177_v3 Cicer arietinum L. HOM05D001477 ORTHO05D001182 1.1e-11 76.3 200 28.5
Rhsim08G0230500 Rhododendron simsii HOM05D001477 ORTHO05D001182 1.5e-11 75.9 374 24.3
Dinv37940 Davidia involucrata HOM05D001477 ORTHO05D001182 2.5e-11 75.1 364 24.7
Atru.chr6.1369 Acer truncatum HOM05D001477 ORTHO05D001182 7.2e-11 73.6 372 24.5
Prupe.3G053600 Prunus persica HOM05D001477 ORTHO05D001182 7.2e-11 73.6 397 24.7
arahy.Tifrunner.gnm1.ann1.BZ4YM3 Arachis hypogaea HOM05D001477 ORTHO05D001182 1.2e-10 72.8 370 26.5
PGSC0003DMG401026447 Solanum tuberosum HOM05D012574 ORTHO05D001182 2.1e-10 72.0 208 30.8
Medtr2g100570 Medicago truncatula HOM05D001477 ORTHO05D001182 1.0e-09 69.7 207 29.5
Psat5g295000 Pisum sativum HOM05D001477 ORTHO05D001182 1.4e-09 69.3 367 24.3
MD09G1093500 Malus domestica HOM05D006186 ORTHO05D009138 2.3e-09 68.6 280 25.7
Oeu037539.1 Olea europaea HOM05D001477 ORTHO05D001182 2.3e-09 68.6 220 27.3
Manes.09G003200 Manihot esculenta HOM05D001477 ORTHO05D001182 3.0e-09 68.2 374 22.7
PGSC0003DMG400044006 Solanum tuberosum HOM05D009966 ORTHO05D012083 3.0e-09 68.2 169 31.4
AUR62022295 Chenopodium quinoa HOM05D001477 ORTHO05D001182 5.2e-09 67.4 391 22.3
Haze_18899 Corylus avellana HOM05D001477 ORTHO05D001182 1.2e-08 66.2 230 26.1
Peaxi162Scf00015g00536 Petunia axillaris HOM05D009966 ORTHO05D012083 1.2e-08 66.2 113 35.4
Haze_00867 Corylus avellana HOM05D001477 ORTHO05D001182 2.6e-08 65.1 249 26.9
Ah.01g017020 Amaranthus hybridus HOM05D001477 ORTHO05D001182 5.7e-08 63.9 159 30.2
TPR.G6557 Trifolium pratense HOM05D001477 ORTHO05D001182 5.7e-08 63.9 376 21.8
Cfa015667 Carpinus fangiana HOM05D001477 ORTHO05D001182 9.8e-08 63.2 212 27.4
Haze_03787 Corylus avellana HOM05D001477 ORTHO05D001182 9.8e-08 63.2 382 23.0
arahy.Tifrunner.gnm1.ann1.ZKXL37 Arachis hypogaea HOM05D001477 ORTHO05D001182 1.3e-07 62.8 376 23.1
arahy.Tifrunner.gnm1.ann1.THM2IN Arachis hypogaea HOM05D001477 ORTHO05D001182 1.7e-07 62.4 379 22.7
CsaV3_3G044070 Cucumis sativus L. HOM05D001477 ORTHO05D001182 2.2e-07 62.0 200 22.0
CAN.G635.12 Capsicum annuum HOM05D001477 ORTHO05D001182 8.3e-07 60.1 199 27.6
Cfa020769 Carpinus fangiana HOM05D001477 ORTHO05D001182 8.3e-07 60.1 394 23.6
PGR083G1680 Punica granatum HOM05D001477 ORTHO05D001182 1.1e-06 59.7 391 23.3
PGSC0003DMG400009532 Solanum tuberosum HOM05D001477 ORTHO05D001182 1.4e-06 59.3 415 23.6
CANSAT54G1299 Cannabis sativa HOM05D000051 ORTHO05D010453 1.8e-06 58.9 282 26.2
AUR62022291 Chenopodium quinoa HOM05D001477 ORTHO05D001182 3.1e-06 58.2 245 25.7
Nitab4.5_0004310g0050 Nicotiana tabacum HOM05D008903 ORTHO05D283715 5.4e-06 57.4 44 63.6
CSS0028141 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 7.0e-06 57.0 150 31.3
Medtr2g100590 Medicago truncatula HOM05D001477 ORTHO05D001182 7.0e-06 57.0 159 28.9
Peaxi162Scf00488g00110 Petunia axillaris HOM05D009966 ORTHO05D012083 7.0e-06 57.0 186 28.0
AUR62023879 Chenopodium quinoa HOM05D001477 ORTHO05D001182 9.1e-06 56.6 240 24.6


User provided reference genes

Program Settings