Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000256g0350 Nicotiana tabacum HOM05D012387 ORTHO05D000007 6.9e-93 344.0 174 100.0
Nitab4.5_0000256g0310 Nicotiana tabacum HOM05D012387 ORTHO05D000007 5.5e-50 201.4 260 50.8
Nitab4.5_0000256g0210 Nicotiana tabacum HOM05D012387 ORTHO05D000022 1.7e-35 153.3 121 69.4
Nitab4.5_0000488g0130 Nicotiana tabacum HOM05D012387 ORTHO05D284219 1.2e-25 120.6 200 42.5
Nitab4.5_0009468g0040 Nicotiana tabacum HOM05D012387 ORTHO05D286106 1.4e-16 90.5 93 55.9
Nitab4.5_0000028g0330 Nicotiana tabacum HOM05D012387 ORTHO05D284939 1.7e-14 83.6 113 46.0
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-13 80.5 49 75.5
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-12 77.0 65 58.5
Nitab4.5_0000431g0210 Nicotiana tabacum HOM05D012387 ORTHO05D000007 2.0e-12 76.6 181 33.7
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 4.6e-12 75.5 49 79.6
Nitab4.5_0001383g0130 Nicotiana tabacum HOM05D012387 ORTHO05D284181 7.8e-12 74.7 131 38.9
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-12 74.7 74 48.6
Nitab4.5_0003347g0050 Nicotiana tabacum HOM05D012387 ORTHO05D283408 1.3e-11 73.9 66 59.1
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 72.8 49 65.3
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 3.9e-11 72.4 49 65.3
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-11 72.4 75 45.3
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.6e-11 71.6 49 65.3
Peaxi162Scf00773g00120 Petunia axillaris HOM05D000024 ORTHO05D000007 8.6e-11 71.2 49 67.3
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-10 70.9 53 62.3
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-10 70.5 70 48.6
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 70.1 61 57.4
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.7 49 61.2
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.7 126 34.9
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 2.5e-10 69.7 101 41.6
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-10 68.9 151 33.8
Nitab4.5_0000993g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-10 68.6 49 65.3
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-10 68.6 188 29.3
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-10 68.2 53 56.6
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 7.3e-10 68.2 49 63.3
Nitab4.5_0006879g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-10 67.8 49 63.3
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 9.5e-10 67.8 101 39.6
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.4 47 59.6
Nitab4.5_0005810g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.4 49 63.3
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 67.0 49 57.1
Nitab4.5_0004214g0030 Nicotiana tabacum HOM05D012387 ORTHO05D000022 2.8e-09 66.2 101 45.5
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 3.6e-09 65.9 49 57.1
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.9 53 56.6
Nitab4.5_0001980g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.9 77 45.5
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 4.7e-09 65.5 129 33.3
Nitab4.5_0000031g0310 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 65.5 49 63.3
Nitab4.5_0001704g0080 Nicotiana tabacum HOM05D012387 ORTHO05D283919 4.7e-09 65.5 117 40.2
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 65.5 47 61.7
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 65.1 126 33.3
Nitab4.5_0000431g0190 Nicotiana tabacum HOM05D012387 ORTHO05D000006 6.2e-09 65.1 92 44.6
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 65.1 69 47.8
Nitab4.5_0000244g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 64.7 58 55.2
Nitab4.5_0002956g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 64.7 49 61.2
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.3 67 47.8
Nitab4.5_0000256g0250 Nicotiana tabacum HOM05D012387 ORTHO05D286871 1.1e-08 64.3 54 66.7
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.3 136 30.9
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.3 61 54.1
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.3 119 34.5
Nitab4.5_0007582g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.3 45 64.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 63.5 49 61.2
CAN.G868.10 Capsicum annuum HOM05D000024 ORTHO05D000007 2.3e-08 63.2 49 59.2
Nitab4.5_0001423g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 63.2 49 61.2
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 63.2 85 43.5
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 62.8 61 50.8
Nitab4.5_0000417g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 70 45.7
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 61 50.8
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 53 56.6
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 47 61.7
Nitab4.5_0007212g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 53 56.6
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 5.2e-08 62.0 47 53.2
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-08 61.6 49 59.2
PGSC0003DMG400027601 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.8e-08 61.6 46 58.7
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-08 61.2 61 47.5
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-08 61.2 47 59.6
Nitab4.5_0000384g0040 Nicotiana tabacum HOM05D011951 ORTHO05D000007 1.2e-07 60.8 49 55.1
Nitab4.5_0000638g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 42 64.3
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 53 52.8
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.5 133 33.1
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.5 49 55.1
Nitab4.5_0000459g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.5 49 55.1
Nitab4.5_0000841g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.5 183 29.5
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 1.5e-07 60.5 174 30.5
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.5 49 55.1
Nitab4.5_0001287g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 59.7 58 53.4
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 59.7 49 51.0
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 59.7 179 31.3
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 59.7 49 57.1
Nitab4.5_0003605g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 59.7 48 54.2
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 2.6e-07 59.7 177 30.5
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-07 59.3 53 50.9
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-07 59.3 69 43.5
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-07 59.3 49 53.1
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.9 49 55.1
Nitab4.5_0000654g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.9 49 55.1
Nitab4.5_0003601g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.9 39 71.8
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.9 61 49.2
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-07 58.5 120 36.7
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-07 58.5 61 45.9
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-07 58.2 177 28.2
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-07 58.2 152 34.9
Nitab4.5_0007963g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-07 58.2 49 57.1
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-07 58.2 49 51.0
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-07 57.8 69 43.5
Nitab4.5_0001360g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-07 57.8 46 50.0
Peaxi162Scf00783g00213 Petunia axillaris HOM05D000155 ORTHO05D000022 9.8e-07 57.8 102 40.2
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.4 61 47.5
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.4 89 37.1
CAN.G529.7 Capsicum annuum HOM05D000024 ORTHO05D000007 1.7e-06 57.0 61 44.3
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 57.0 49 51.0
Nitab4.5_0007267g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 57.0 61 49.2
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 57.0 61 45.9
Peaxi162Scf00166g00017 Petunia axillaris HOM05D000024 ORTHO05D000007 1.7e-06 57.0 53 52.8
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-06 56.6 128 33.6
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 79 43.0
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 49 53.1
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 49 49.0
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 177 27.1
Nitab4.5_0027927g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 109 34.9
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.2e-06 56.6 128 35.9
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-06 56.2 46 54.3
Nitab4.5_0002414g0080 Nicotiana tabacum HOM05D011951 ORTHO05D000007 2.9e-06 56.2 49 53.1
Nitab4.5_0016046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-06 56.2 49 53.1
Nitab4.5_0000261g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.8 52 48.1
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.8 69 40.6
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.8 49 49.0
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-06 55.5 134 31.3
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 4.9e-06 55.5 44 59.1
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 8.3e-06 54.7 40 62.5
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-06 54.7 100 35.0


User provided reference genes

Program Settings