Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.4e-163 578.6 352 100.0
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.4e-139 498.8 356 82.6
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 8.1e-101 371.3 255 77.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.4e-100 369.8 255 77.6
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 3.4e-91 339.3 256 71.5
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 3.3e-78 296.2 194 72.2
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 4.2e-73 279.3 257 54.1
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 7.4e-70 268.5 256 50.8
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 5.3e-68 262.3 262 55.3
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 5.9e-67 258.8 260 53.5
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.0e-66 258.1 156 82.1
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 7.9e-64 248.4 259 51.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.4e-63 247.7 257 51.4
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 7.4e-62 241.9 275 49.1
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 3.7e-61 239.6 263 54.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 2.0e-59 233.8 255 46.7
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.9e-57 227.3 272 47.4
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 5.5e-57 225.7 255 49.0
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 9.4e-57 224.9 255 49.8
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.6e-56 224.2 258 49.6
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.7e-56 223.4 255 49.8
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 6.1e-56 222.2 256 48.0
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.0e-55 221.5 277 44.8
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 5.2e-55 219.2 266 45.9
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.5e-54 217.6 260 45.0
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.5e-54 217.6 245 48.6
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 2.0e-54 217.2 270 44.4
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 5.7e-54 215.7 255 46.7
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.7e-53 214.2 260 44.6
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.8e-53 213.4 253 46.2
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.7e-53 213.0 254 45.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 4.8e-53 212.6 262 49.2
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 4.1e-52 209.5 267 47.6
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 9.1e-52 208.4 249 42.2
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.6e-51 207.6 259 43.6
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 4.5e-51 206.1 251 44.6
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.0e-50 204.9 249 43.4
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.0e-50 204.9 261 45.2
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 1.7e-50 204.1 263 47.5
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 2.2e-50 203.8 250 44.4
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 3.8e-50 203.0 267 46.1
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 6.5e-50 202.2 255 41.6
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 8.5e-50 201.8 260 45.4
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.1e-49 201.4 261 44.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.5e-49 201.1 256 48.8
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.5e-49 200.3 257 45.5
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.2e-48 198.0 255 42.4
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 6.1e-48 195.7 260 43.5
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.4e-47 194.5 187 51.3
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.3e-47 193.7 255 45.9
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.3e-47 193.7 263 44.1
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 4.0e-47 193.0 256 44.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 6.8e-47 192.2 260 41.9
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 2.6e-46 190.3 162 59.9
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 5.7e-46 189.1 242 44.6
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 7.5e-46 188.7 251 43.0
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 9.8e-46 188.3 266 42.5
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 3.7e-45 186.4 268 40.3
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 4.8e-45 186.0 268 44.0
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.1e-44 181.8 262 45.0
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.1e-44 181.8 262 45.0
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.0e-42 178.3 253 43.1
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 2.2e-42 177.2 255 40.8
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 6.5e-42 175.6 255 44.7
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 8.5e-42 175.3 259 40.2
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 8.5e-42 175.3 260 42.7
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.9e-41 174.1 254 42.5
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 3.2e-41 173.3 262 42.7
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 3.2e-41 173.3 262 42.7
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 7.2e-41 172.2 276 38.8
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 7.2e-41 172.2 200 42.0
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 7.2e-41 172.2 256 43.0
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 6.1e-40 169.1 255 42.7
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 6.8e-39 165.6 188 45.2
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 1.5e-38 164.5 255 43.5
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.6e-38 163.7 255 41.6
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 4.4e-38 162.9 257 38.1
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 5.7e-38 162.5 261 42.1
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.3e-37 161.4 300 35.3
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.2e-37 160.6 258 38.8
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 6.3e-37 159.1 200 44.0
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 9.2e-36 155.2 273 36.6
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.6e-35 154.5 262 43.1
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 3.5e-35 153.3 262 43.9
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 4.5e-35 152.9 232 40.1
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.0e-34 151.8 254 40.9
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.7e-34 151.0 259 39.0
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.0e-31 141.7 159 49.1
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 4.9e-29 132.9 279 33.7
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 2.3e-26 124.0 105 55.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 9.8e-22 108.6 289 33.2
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 3.7e-21 106.7 195 34.9
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.1e-20 103.2 168 41.7
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 5.6e-17 92.8 274 29.9
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.2e-11 75.1 135 34.8
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 1.7e-10 71.2 112 34.8
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 1.9e-09 67.8 81 55.6
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 7.3e-09 65.9 79 45.6


User provided reference genes

Program Settings