Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000254g0120 Nicotiana tabacum HOM05D000028 ORTHO05D286897 4.6e-65 251.1 133 100.0
Nitab4.5_0010542g0050 Nicotiana tabacum HOM05D000028 ORTHO05D000296 9.5e-18 94.0 68 67.6
Nitab4.5_0006831g0020 Nicotiana tabacum HOM05D000028 ORTHO05D000296 1.2e-17 93.6 71 66.2
Solyc09g010360.3 Solanum lycopersicum HOM05D000028 ORTHO05D000296 2.7e-12 75.9 62 58.1
Sopen09g005090 Solanum pennellii HOM05D000028 ORTHO05D000296 2.7e-12 75.9 62 58.1
Manes.08G077200 Manihot esculenta HOM05D000028 ORTHO05D000296 4.5e-12 75.1 63 58.7
Peaxi162Scf00039g01017 Petunia axillaris HOM05D000028 ORTHO05D000296 4.5e-12 75.1 62 59.7
PGSC0003DMG400008854 Solanum tuberosum HOM05D000028 ORTHO05D000296 1.3e-11 73.6 62 56.5
Hma1.2p1_1707F.1_g298470 Hydrangea macrophylla HOM05D000028 ORTHO05D000296 2.3e-11 72.8 59 59.3
Hma1.2p1_0350F.1_g132430 Hydrangea macrophylla HOM05D000028 ORTHO05D000296 5.0e-11 71.6 67 52.2
CSS0047968 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 6.6e-11 71.2 59 55.9
CAN.G807.2 Capsicum annuum HOM05D000028 ORTHO05D000296 6.6e-11 71.2 59 57.6
Actinidia19761 Actinidia chinensis HOM05D000028 ORTHO05D000296 1.1e-10 70.5 59 54.2
EL10Ac7g17291 Beta vulgaris HOM05D000028 ORTHO05D000296 1.1e-10 70.5 61 55.7
Nitab4.5_0008142g0020 Nicotiana tabacum HOM05D000028 ORTHO05D000296 1.5e-10 70.1 62 56.5
MSTRG.5690 Avicennia marina HOM05D000028 ORTHO05D000296 1.9e-10 69.7 80 42.5
Lj3C972G2 Lonicera japonica HOM05D000028 ORTHO05D000296 2.5e-10 69.3 64 53.1
Atru.chr8.1926 Acer truncatum HOM05D000028 ORTHO05D000296 4.3e-10 68.6 64 57.8
Nitab4.5_0011862g0010 Nicotiana tabacum HOM05D000028 ORTHO05D000296 4.3e-10 68.6 59 57.6
Ciclev10012001m.g Citrus clementina HOM05D000028 ORTHO05D000296 5.6e-10 68.2 63 54.0
DCAR_014831 Daucus carota HOM05D000028 ORTHO05D000296 5.6e-10 68.2 59 54.2
Lsat_1_v5_gn_1_55900 Lactuca sativa HOM05D000028 ORTHO05D000296 5.6e-10 68.2 62 51.6
DCAR_017887 Daucus carota HOM05D000028 ORTHO05D000296 7.3e-10 67.8 59 52.5
SalBow3G0609 Salvia bowleyana HOM05D000028 ORTHO05D000296 7.3e-10 67.8 62 53.2
Ah.10g033470 Amaranthus hybridus HOM05D000028 ORTHO05D000296 9.5e-10 67.4 59 50.8
Lsat_1_v5_gn_6_32480 Lactuca sativa HOM05D000028 ORTHO05D000296 1.2e-09 67.0 62 53.2
AUR62042128 Chenopodium quinoa HOM05D000028 ORTHO05D000296 1.6e-09 66.6 61 52.5
Migut.J00368 Erythranthe guttata HOM05D000028 ORTHO05D000296 2.1e-09 66.2 61 52.5
QL07p046973 Quercus lobata HOM05D000028 ORTHO05D000296 2.1e-09 66.2 61 54.1
Phvul.001G170400 Phaseolus vulgaris HOM05D000028 ORTHO05D000296 2.8e-09 65.9 61 55.7
Potri.006G082700 Populus trichocarpa HOM05D000028 ORTHO05D000296 2.8e-09 65.9 60 51.7
BcaC01g05615 Brassica carinata HOM05D000028 ORTHO05D000296 3.6e-09 65.5 67 49.3
BolC3t14824H Brassica oleracea HOM05D000028 ORTHO05D000296 3.6e-09 65.5 67 49.3
BraA03t11308Z Brassica rapa HOM05D000028 ORTHO05D000296 3.6e-09 65.5 67 49.3
Cfa017434 Carpinus fangiana HOM05D000028 ORTHO05D000296 3.6e-09 65.5 65 49.2
QL07p046833 Quercus lobata HOM05D000028 ORTHO05D000296 3.6e-09 65.5 61 54.1
vmacro20119 Vaccinium macrocarpon HOM05D000028 ORTHO05D000296 4.7e-09 65.1 65 49.2
MSTRG.19107 Avicennia marina HOM05D000028 ORTHO05D000296 6.1e-09 64.7 54 53.7
A03p20670 Brassica napus HOM05D000028 ORTHO05D000296 6.1e-09 64.7 67 49.3
Ca_09599_v3 Cicer arietinum L. HOM05D000028 ORTHO05D000296 8.0e-09 64.3 61 52.5
Migut.L01290 Erythranthe guttata HOM05D000028 ORTHO05D000296 8.0e-09 64.3 63 46.0
Eucgr.K03165 Eucalyptus grandis HOM05D000028 ORTHO05D000296 8.0e-09 64.3 86 41.9
AUR62040318 Chenopodium quinoa HOM05D000028 ORTHO05D000296 1.0e-08 63.9 61 50.8
AUR62043985 Chenopodium quinoa HOM05D000028 ORTHO05D000296 1.0e-08 63.9 61 50.8
Haze_20736 Corylus avellana HOM05D000028 ORTHO05D000296 1.0e-08 63.9 63 49.2
HanXRQChr01g0026591 Helianthus annuus HOM05D000028 ORTHO05D000296 1.0e-08 63.9 63 50.8
Lj1g0024700 Lotus japonicus HOM05D000028 ORTHO05D000296 1.0e-08 63.9 58 55.2
BcaB01g03776 Brassica carinata HOM05D000028 ORTHO05D000296 1.4e-08 63.5 67 49.3
Cpa.g.sc163.29 Carica papaya HOM05D000028 ORTHO05D000296 1.4e-08 63.5 54 55.6
FvH4_6g14370 Fragaria vesca HOM05D000028 ORTHO05D000296 1.4e-08 63.5 58 56.9
FAN14G1065 Fragaria x ananassa HOM05D000028 ORTHO05D000296 1.4e-08 63.5 58 56.9
BcaB06g28994 Brassica carinata HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 47.8
BcaC02g11855 Brassica carinata HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 47.8
A05p08480 Brassica napus HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 49.3
C04p10570 Brassica napus HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 49.3
BolC4t22648H Brassica oleracea HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 49.3
BraA05t19817Z Brassica rapa HOM05D000028 ORTHO05D000296 1.8e-08 63.2 67 49.3
FAN02G3331 Fragaria x ananassa HOM05D000028 ORTHO05D000296 1.8e-08 63.2 58 56.9
FAN05G1525 Fragaria x ananassa HOM05D000028 ORTHO05D000296 1.8e-08 63.2 58 56.9
FAN09G2108 Fragaria x ananassa HOM05D000028 ORTHO05D000296 1.8e-08 63.2 58 56.9
Medtr1g068630 Medicago truncatula HOM05D000028 ORTHO05D000296 1.8e-08 63.2 64 48.4
C03p24290 Brassica napus HOM05D000028 ORTHO05D000296 2.3e-08 62.8 67 47.8
Eucgr.K03164 Eucalyptus grandis HOM05D000028 ORTHO05D000296 2.3e-08 62.8 86 40.7
Eucgr.K03168 Eucalyptus grandis HOM05D000028 ORTHO05D000296 2.3e-08 62.8 86 40.7
Thhalv10016799m.g Eutrema salsugineum HOM05D000028 ORTHO05D000296 2.3e-08 62.8 67 47.8
PGR004G0684 Punica granatum HOM05D000028 ORTHO05D000296 2.3e-08 62.8 63 47.6
AT2G37460 Arabidopsis thaliana HOM05D000028 ORTHO05D000296 3.1e-08 62.4 67 47.8
HanXRQChr13g0399251 Helianthus annuus HOM05D000028 ORTHO05D000296 3.1e-08 62.4 62 48.4
AL4G33890 Arabidopsis lyrata HOM05D000028 ORTHO05D000296 4.0e-08 62.0 67 47.8
Carub.0004s1939 Capsella rubella HOM05D000028 ORTHO05D000296 4.0e-08 62.0 67 47.8
CARHR132140 Cardamine hirsuta HOM05D000028 ORTHO05D000296 4.0e-08 62.0 67 46.3
Glyma.03G172900 Glycine max HOM05D000028 ORTHO05D000296 4.0e-08 62.0 61 50.8
Gohir.A04G079700 Gossypium hirsutum HOM05D000028 ORTHO05D000296 4.0e-08 62.0 56 51.8
Gohir.D04G119000 Gossypium hirsutum HOM05D000028 ORTHO05D000296 4.0e-08 62.0 56 51.8
Gorai.009G424100 Gossypium raimondii HOM05D000028 ORTHO05D000296 4.0e-08 62.0 56 51.8
HanXRQChr13g0399241 Helianthus annuus HOM05D000028 ORTHO05D000296 4.0e-08 62.0 62 48.4
Lsat_1_v5_gn_6_32800 Lactuca sativa HOM05D000028 ORTHO05D000296 4.0e-08 62.0 62 50.0
Lalb_Chr01g0019221 Lupinus albus HOM05D000028 ORTHO05D000296 4.0e-08 62.0 58 51.7
Sp4g19800 Schrenkiella parvula HOM05D000028 ORTHO05D000296 4.0e-08 62.0 67 47.8
Gohir.A09G158800 Gossypium hirsutum HOM05D000028 ORTHO05D000296 5.2e-08 61.6 54 57.4
Lj5g0025274 Lotus japonicus HOM05D000028 ORTHO05D000296 5.2e-08 61.6 58 50.0
THA.LOC104806582 Tarenaya hassleriana HOM05D000028 ORTHO05D000296 5.2e-08 61.6 56 53.6
BraA04t18337Z Brassica rapa HOM05D000028 ORTHO05D000296 6.8e-08 61.2 64 48.4
Glyma.19G173800 Glycine max HOM05D000028 ORTHO05D000296 6.8e-08 61.2 61 52.5
Gohir.D09G154400 Gossypium hirsutum HOM05D000028 ORTHO05D000296 6.8e-08 61.2 60 53.3
Gorai.006G175800 Gossypium raimondii HOM05D000028 ORTHO05D000296 6.8e-08 61.2 60 53.3
Sabra06G0062400 Salix brachista HOM05D000028 ORTHO05D000296 6.8e-08 61.2 54 55.6
Sed0002595 Sechium edule HOM05D000028 ORTHO05D000296 6.8e-08 61.2 54 55.6
TWI74G0911 Tripterygium wilfordii HOM05D000028 ORTHO05D000296 6.8e-08 61.2 58 50.0
Duzib093G1427 Durio zibethinus HOM05D000028 ORTHO05D000296 8.9e-08 60.8 56 48.2
unitig_16.g32859 Utricularia gibba HOM05D000028 ORTHO05D000296 8.9e-08 60.8 59 49.2
unitig_8.g4092 Utricularia gibba HOM05D000028 ORTHO05D000296 8.9e-08 60.8 59 49.2
VMungo1383G1937 Vigna mungo HOM05D000028 ORTHO05D000296 8.9e-08 60.8 61 49.2
Ca_08793_v3 Cicer arietinum L. HOM05D000028 ORTHO05D000296 1.2e-07 60.5 58 51.7
ClCG04G008440 Citrullus lanatus HOM05D000028 ORTHO05D000296 1.2e-07 60.5 54 55.6
MELO3C003105.2 Cucumis melo HOM05D000028 ORTHO05D000296 1.2e-07 60.5 54 55.6
CsaV3_4G024710 Cucumis sativus L. HOM05D000028 ORTHO05D000296 1.2e-07 60.5 54 55.6
Oeu044409.1 Olea europaea HOM05D000028 ORTHO05D025850 1.2e-07 60.5 58 48.3
TPR.G21462 Trifolium pratense HOM05D000028 ORTHO05D000296 1.2e-07 60.5 64 51.6
Psat0s3072g0120 Pisum sativum HOM05D000028 ORTHO05D000296 1.5e-07 60.1 58 51.7
RcHm_v2.0_Chr3g0467431 Rosa chinensis HOM05D000028 ORTHO05D000296 1.5e-07 60.1 54 57.4
Solyc12g098280.3 Solanum lycopersicum HOM05D000028 ORTHO05D000296 1.5e-07 60.1 62 50.0
Thecc.10G047800 Theobroma cacao HOM05D000028 ORTHO05D000296 1.5e-07 60.1 62 41.9
Migut.L01622 Erythranthe guttata HOM05D000028 ORTHO05D000296 2.0e-07 59.7 59 44.1
Psat3g048520 Pisum sativum HOM05D000028 ORTHO05D000296 2.0e-07 59.7 58 51.7
BcaC02g07529 Brassica carinata HOM05D000028 ORTHO05D000296 2.6e-07 59.3 67 46.3
C04p65920 Brassica napus HOM05D000028 ORTHO05D000296 2.6e-07 59.3 67 46.3
BolC4t28096H Brassica oleracea HOM05D000028 ORTHO05D000296 2.6e-07 59.3 67 46.3
Duzib114G0248 Durio zibethinus HOM05D000028 ORTHO05D000296 2.6e-07 59.3 62 41.9
Duzib114G0985 Durio zibethinus HOM05D000028 ORTHO05D000296 2.6e-07 59.3 62 41.9
Lalb_Chr21g0314391 Lupinus albus HOM05D000028 ORTHO05D000296 2.6e-07 59.3 67 46.3
MD04G1120400 Malus domestica HOM05D000028 ORTHO05D000296 2.6e-07 59.3 54 55.6
A04p28590 Brassica napus HOM05D000028 ORTHO05D000296 3.4e-07 58.9 54 55.6
COL.COLO4_14862 Corchorus olitorius HOM05D000028 ORTHO05D000296 3.4e-07 58.9 56 48.2
Nn2g10463 Nelumbo nucifera HOM05D000028 ORTHO05D000296 3.4e-07 58.9 59 45.8
TPR.G10544 Trifolium pratense HOM05D000028 ORTHO05D000296 3.4e-07 58.9 76 42.1
Glyma.10G044800 Glycine max HOM05D000028 ORTHO05D000296 4.4e-07 58.5 64 46.9
QL08p058850 Quercus lobata HOM05D000028 ORTHO05D000296 4.4e-07 58.5 58 43.1
unitig_17.g29371 Utricularia gibba HOM05D000028 ORTHO05D000296 4.4e-07 58.5 54 51.9
Aa31LG5G22880 Aethionema arabicum HOM05D000028 ORTHO05D000296 5.8e-07 58.2 67 43.3
Cc09_g02950 Coffea canephora HOM05D000028 ORTHO05D001176 5.8e-07 58.2 69 44.9
Duzib106G1453 Durio zibethinus HOM05D000028 ORTHO05D000296 5.8e-07 58.2 56 46.4
Eucgr.L01666 Eucalyptus grandis HOM05D000028 ORTHO05D000296 5.8e-07 58.2 59 49.2
Thecc.05G045200 Theobroma cacao HOM05D000028 ORTHO05D000296 5.8e-07 58.2 56 50.0
arahy.Tifrunner.gnm1.ann1.4F9F0A Arachis hypogaea HOM05D000028 ORTHO05D000296 7.5e-07 57.8 60 48.3
arahy.Tifrunner.gnm1.ann1.M5LIDL Arachis hypogaea HOM05D000028 ORTHO05D000296 7.5e-07 57.8 60 48.3
Duzib128G1381 Durio zibethinus HOM05D000028 ORTHO05D000296 7.5e-07 57.8 63 42.9
Prupe.6G249600 Prunus persica HOM05D000028 ORTHO05D000296 7.5e-07 57.8 54 51.9
QL08p058887 Quercus lobata HOM05D000028 ORTHO05D000296 7.5e-07 57.8 59 44.1
Hund20131 Selenicereus undatus HOM05D000028 ORTHO05D000296 7.5e-07 57.8 53 56.6
AT5G13670 Arabidopsis thaliana HOM05D000028 ORTHO05D000296 9.8e-07 57.4 58 43.1
DCAR_017888 Daucus carota HOM05D000028 ORTHO05D000296 9.8e-07 57.4 59 45.8
Glyma.13G132500 Glycine max HOM05D000028 ORTHO05D000296 9.8e-07 57.4 64 46.9
Hund20010 Selenicereus undatus HOM05D000028 ORTHO05D000296 9.8e-07 57.4 59 44.1
QL08p058819 Quercus lobata HOM05D000028 ORTHO05D000296 1.3e-06 57.0 62 43.5
AL6G24280 Arabidopsis lyrata HOM05D000028 ORTHO05D000296 1.7e-06 56.6 60 43.3
arahy.Tifrunner.gnm1.ann1.5B5NV8 Arachis hypogaea HOM05D000028 ORTHO05D000296 1.7e-06 56.6 56 51.8
arahy.Tifrunner.gnm1.ann1.V45V7K Arachis hypogaea HOM05D000028 ORTHO05D000296 1.7e-06 56.6 56 51.8
Lsat_1_v5_gn_8_15940 Lactuca sativa HOM05D000028 ORTHO05D000296 1.7e-06 56.6 66 43.9
Lj1g0018920 Lotus japonicus HOM05D000028 ORTHO05D000296 1.7e-06 56.6 58 48.3
TPR.G31893 Trifolium pratense HOM05D000028 ORTHO05D000296 1.7e-06 56.6 56 50.0
CSS0013385 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 2.2e-06 56.2 38 65.8
CAN.G268.19 Capsicum annuum HOM05D000028 ORTHO05D001176 2.2e-06 56.2 70 41.4
CiPaw.02G181600 Carya illinoinensis HOM05D000028 ORTHO05D000296 2.2e-06 56.2 59 45.8
HanXRQChr11g0349371 Helianthus annuus HOM05D000028 ORTHO05D000296 2.2e-06 56.2 63 44.4
Lj1g0010396 Lotus japonicus HOM05D000028 ORTHO05D000296 2.2e-06 56.2 58 50.0
Nn2g12897 Nelumbo nucifera HOM05D000028 ORTHO05D000296 2.2e-06 56.2 59 44.1
VMungo0720G0289 Vigna mungo HOM05D000028 ORTHO05D000296 2.2e-06 56.2 63 47.6
Carub.0004s0500 Capsella rubella HOM05D000028 ORTHO05D000296 2.9e-06 55.8 56 46.4
Cfa001514 Carpinus fangiana HOM05D000028 ORTHO05D000296 2.9e-06 55.8 67 41.8
PSO384G1982 Papaver somniferum HOM05D000028 ORTHO05D000296 2.9e-06 55.8 60 43.3
Sed0012702 Sechium edule HOM05D000028 ORTHO05D000296 2.9e-06 55.8 63 39.7
A04p28610 Brassica napus HOM05D000028 ORTHO05D000296 3.7e-06 55.5 67 40.3
BraA04t18338Z Brassica rapa HOM05D000028 ORTHO05D000296 3.7e-06 55.5 67 40.3
Ciclev10031857m.g Citrus clementina HOM05D000028 ORTHO05D000296 3.7e-06 55.5 62 41.9
BcaB06g28996 Brassica carinata HOM05D000028 ORTHO05D000296 4.9e-06 55.1 67 40.3
BcaC02g07530 Brassica carinata HOM05D000028 ORTHO05D000296 4.9e-06 55.1 67 38.8
C04p65930 Brassica napus HOM05D000028 ORTHO05D000296 4.9e-06 55.1 67 38.8
BolC4t28097H Brassica oleracea HOM05D000028 ORTHO05D000296 4.9e-06 55.1 67 38.8
CDE09G1069 Ceratophyllum demersum HOM05D000028 ORTHO05D000296 4.9e-06 55.1 61 37.7
Duzib106G1798 Durio zibethinus HOM05D000028 ORTHO05D000296 4.9e-06 55.1 59 40.7
Lalb_Chr02g0153131 Lupinus albus HOM05D000028 ORTHO05D000296 4.9e-06 55.1 63 42.9
Dinv41082 Davidia involucrata HOM05D000028 ORTHO05D001176 6.4e-06 54.7 57 45.6
Medtr7g100050 Medicago truncatula HOM05D000028 ORTHO05D000296 6.4e-06 54.7 58 50.0
Sed0012221 Sechium edule HOM05D000028 ORTHO05D000296 6.4e-06 54.7 54 44.4
THA.LOC104823430 Tarenaya hassleriana HOM05D000028 ORTHO05D000296 6.4e-06 54.7 61 47.5
Thhalv10013837m.g Eutrema salsugineum HOM05D000028 ORTHO05D000296 8.3e-06 54.3 58 41.4
Gohir.A05G350600 Gossypium hirsutum HOM05D000028 ORTHO05D000296 8.3e-06 54.3 62 40.3
PSO339G3368 Papaver somniferum HOM05D000028 ORTHO05D000296 8.3e-06 54.3 60 41.7
QL08p058895 Quercus lobata HOM05D000028 ORTHO05D000296 8.3e-06 54.3 59 42.4
Sabra10G0161600 Salix brachista HOM05D000028 ORTHO05D000296 8.3e-06 54.3 58 43.1
THA.LOC104824261 Tarenaya hassleriana HOM05D000028 ORTHO05D000296 8.3e-06 54.3 54 48.1
GSVIVG01025616001 Vitis vinifera HOM05D000028 ORTHO05D000296 8.3e-06 54.3 54 51.9


User provided reference genes

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