Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.4e-198 696.0 346 100.0
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.1e-193 679.9 346 98.3
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 8.4e-175 617.1 346 88.4
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 4.1e-174 614.8 346 87.9
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 2.1e-173 612.5 346 87.6
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 5.4e-158 561.2 348 81.0
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 7.4e-155 550.8 359 78.6
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 4.8e-154 548.1 346 78.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 5.3e-153 544.7 352 76.7
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 2.6e-152 542.3 320 85.0
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 4.5e-152 541.6 343 78.7
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 6.4e-151 537.7 353 76.5
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 4.3e-147 525.0 352 74.4
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 7.4e-147 524.2 353 75.9
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.3e-146 523.5 347 74.4
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.6e-146 523.1 347 76.9
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.1e-145 520.4 343 76.1
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 1.4e-142 510.0 376 69.7
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 7.1e-142 507.7 354 71.2
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 7.1e-142 507.7 361 70.6
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 3.5e-141 505.4 354 71.8
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 4.6e-141 505.0 347 72.0
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 4.6e-141 505.0 354 70.6
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 3.0e-140 502.3 360 70.0
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 3.0e-140 502.3 356 70.2
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 3.9e-140 501.9 363 71.3
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.9e-140 501.9 353 70.8
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 8.7e-140 500.7 355 71.0
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.9e-139 499.6 363 70.8
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 2.5e-139 499.2 366 71.0
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.3e-139 498.8 353 70.5
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 4.3e-139 498.4 365 71.2
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 7.4e-139 497.7 358 69.0
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 9.7e-139 497.3 363 70.5
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.3e-138 496.9 357 69.5
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.6e-138 496.5 356 69.9
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.6e-138 496.5 353 70.5
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 2.2e-138 496.1 356 70.8
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 2.8e-138 495.7 351 70.9
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 3.7e-138 495.4 354 69.8
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.7e-138 495.4 354 69.8
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 4.8e-138 495.0 358 70.4
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.8e-138 495.0 358 68.7
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 8.2e-138 494.2 355 69.6
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 8.2e-138 494.2 355 69.9
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 8.2e-138 494.2 356 71.6
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.1e-137 493.8 357 70.6
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.1e-137 493.8 360 69.2
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.4e-137 493.4 354 70.3
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.8e-137 493.0 356 69.4
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.4e-137 492.7 358 70.4
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 9.0e-137 490.7 350 70.0
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.5e-136 490.0 356 68.8
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.6e-136 489.2 372 66.7
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.6e-136 489.2 359 68.8
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.4e-136 488.8 367 69.8
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.4e-136 488.8 367 69.8
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 4.5e-136 488.4 357 68.6
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 4.5e-136 488.4 357 68.6
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 5.9e-136 488.0 357 68.3
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 5.9e-136 488.0 358 68.7
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 7.6e-136 487.6 348 68.7
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 7.6e-136 487.6 368 68.5
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 7.6e-136 487.6 367 70.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 7.6e-136 487.6 363 67.5
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.0e-135 487.3 349 71.1
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.3e-135 486.9 326 73.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 1.3e-135 486.9 368 68.5
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.3e-135 486.9 355 69.0
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 2.9e-135 485.7 357 68.1
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 3.8e-135 485.3 349 68.5
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 3.8e-135 485.3 359 69.4
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.9e-134 483.0 353 70.0
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 2.5e-134 482.6 361 69.0
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.5e-134 482.6 356 69.9
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 4.2e-134 481.9 356 68.5
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 5.5e-134 481.5 358 70.7
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 1.6e-133 479.9 363 68.9
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 3.6e-133 478.8 361 67.6
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 3.0e-132 475.7 370 66.5
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 2.5e-131 472.6 374 66.0
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 3.3e-131 472.2 379 66.2
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 3.3e-131 472.2 379 66.2
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 5.7e-131 471.5 364 67.0
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 7.4e-131 471.1 351 68.7
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.4e-129 466.8 356 66.0
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.4e-129 466.1 350 69.1
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 6.9e-129 464.5 440 58.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.1e-126 457.2 357 65.3
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.9e-126 456.4 358 65.9
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.5e-126 454.9 362 66.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.2e-125 453.8 358 64.8
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 4.7e-125 451.8 359 64.3
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 2.3e-124 449.5 362 64.4
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 4.8e-122 441.8 357 65.0
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 8.2e-122 441.0 337 67.7
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 8.2e-122 441.0 360 64.7
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 2.0e-120 436.4 353 62.9
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.4e-120 435.6 327 69.4
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 7.7e-120 434.5 353 62.6
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.4e-118 430.3 330 67.6
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 2.5e-118 429.5 334 65.9
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.2e-117 427.2 367 61.9
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.3e-114 417.2 350 61.4
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 5.3e-113 411.8 297 68.7
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.6e-112 409.5 352 58.2
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 3.2e-110 402.5 297 66.0
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 3.0e-108 396.0 355 57.7
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.7e-106 389.0 297 64.0
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 2.2e-103 379.8 286 69.6
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 6.5e-103 378.3 292 67.8
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 4.2e-102 375.6 325 61.5
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.7e-101 372.9 292 68.2
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.4e-100 370.5 228 78.5
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 7.5e-99 364.8 194 88.7
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 7.5e-99 364.8 194 88.7
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 1.7e-98 363.6 350 56.3
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 4.8e-98 362.1 337 57.0
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 5.4e-97 358.6 301 58.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.0e-96 356.7 355 55.5
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.3e-95 354.0 194 86.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.5e-94 348.6 334 53.9
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 2.1e-93 346.7 295 55.6
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.8e-93 346.3 319 57.4
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.7e-93 345.5 349 52.7
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 5.6e-70 268.9 153 82.4
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 4.6e-64 249.2 210 61.9
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 3.0e-63 246.5 196 63.3
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.8e-59 232.3 126 83.3
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 6.0e-56 222.2 180 65.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 9.3e-49 198.4 334 40.4
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 5.6e-46 189.1 100 86.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.9e-34 149.4 159 53.5
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.6e-32 144.4 101 74.3
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.3e-31 141.4 142 55.6
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.3e-29 134.8 88 72.7
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 3.4e-27 126.7 73 76.7
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 5.8e-27 125.9 159 47.2
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 5.8e-27 125.9 73 76.7
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 2.1e-24 117.5 236 39.4
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 6.7e-15 85.9 127 38.6
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 4.1e-12 76.6 43 76.7
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 7.9e-08 62.4 72 52.8


User provided reference genes

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