Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.2e-95 351.7 170 100.0
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-91 339.7 170 96.5
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.4e-89 331.6 168 94.0
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 7.7e-89 330.5 168 93.5
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 7.9e-86 320.5 170 91.2
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 6.7e-85 317.4 170 87.1
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.7e-83 312.8 170 86.5
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 4.8e-83 311.2 170 85.3
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 8.2e-83 310.5 170 87.1
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 3.1e-82 308.5 166 86.1
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.2e-81 306.6 170 84.7
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.2e-81 306.6 170 85.3
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.6e-81 306.2 170 87.6
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.0e-81 305.8 170 84.7
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.6e-81 305.4 170 85.3
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 2.6e-81 305.4 170 84.7
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 2.6e-81 305.4 170 85.3
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 3.5e-81 305.1 168 86.3
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.5e-81 304.7 165 87.3
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.9e-81 304.3 170 84.7
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.9e-81 304.3 170 84.7
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.0e-80 303.5 168 85.1
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.9e-80 302.0 169 83.4
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.1e-79 300.1 171 85.4
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.1e-79 300.1 168 82.7
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.5e-79 298.9 167 86.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 4.2e-79 298.1 171 84.2
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.2e-79 298.1 169 85.2
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 5.5e-79 297.7 170 83.5
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 9.4e-79 297.0 171 83.6
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.6e-78 296.2 168 81.5
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 2.1e-78 295.8 166 83.7
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.7e-78 295.4 166 83.1
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 4.7e-78 294.7 171 82.5
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 4.7e-78 294.7 169 82.8
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.0e-78 293.9 167 82.0
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 8.0e-78 293.9 164 83.5
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 8.0e-78 293.9 171 82.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.0e-77 293.5 170 83.5
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.0e-77 293.5 169 82.2
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 1.8e-77 292.7 170 82.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 3.0e-77 292.0 168 81.0
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 6.7e-77 290.8 170 83.5
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 6.7e-77 290.8 167 82.0
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 8.8e-77 290.4 164 84.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 1.1e-76 290.0 166 83.7
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.1e-76 290.0 164 84.1
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.5e-76 289.7 173 81.5
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.5e-76 289.7 168 81.0
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.5e-76 289.7 168 81.5
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.0e-76 289.3 173 82.1
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.6e-76 288.9 172 81.4
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.6e-76 288.9 174 79.3
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.3e-76 288.5 171 80.1
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 4.4e-76 288.1 164 82.3
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 7.5e-76 287.3 168 83.3
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.3e-75 286.6 164 83.5
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.7e-75 286.2 169 78.7
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.2e-75 285.8 153 87.6
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.8e-75 285.4 171 79.5
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 2.8e-75 285.4 155 85.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 8.2e-75 283.9 155 85.8
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 8.2e-75 283.9 165 82.4
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 8.2e-75 283.9 173 80.3
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.1e-74 283.5 165 80.6
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.8e-74 282.7 164 79.9
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 2.4e-74 282.3 173 80.9
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 5.3e-74 281.2 165 80.0
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 7.0e-74 280.8 165 80.6
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.1e-74 280.4 165 80.6
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.6e-73 279.6 153 85.6
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 2.2e-72 275.8 164 79.9
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 2.2e-72 275.8 168 76.8
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 2.9e-72 275.4 157 83.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.8e-72 275.0 170 77.6
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.0e-72 274.6 165 77.0
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.0e-72 274.6 165 77.0
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 5.0e-72 274.6 165 78.8
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 8.5e-72 273.9 151 85.4
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 1.1e-71 273.5 164 79.3
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 3.2e-71 271.9 165 77.6
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 9.4e-71 270.4 162 78.4
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 2.7e-70 268.9 188 72.3
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.6e-70 268.5 170 77.6
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 3.6e-70 268.5 163 77.3
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 6.1e-70 267.7 151 82.1
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.1e-70 267.7 166 77.1
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 4.0e-69 265.0 165 77.0
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 5.2e-69 264.6 165 75.8
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 8.8e-69 263.8 170 76.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.6e-68 262.3 166 72.9
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 4.4e-68 261.5 168 75.6
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 5.7e-68 261.2 165 76.4
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.8e-67 258.8 165 74.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 6.3e-67 257.7 155 77.4
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.0e-66 254.2 151 79.5
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 1.2e-65 253.4 167 74.9
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.6e-65 253.1 151 78.8
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 3.5e-65 251.9 166 72.9
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.0e-64 250.4 161 73.9
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.0e-64 250.4 157 77.7
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.3e-64 250.0 151 78.1
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 3.8e-64 248.4 139 82.7
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 3.8e-64 248.4 139 82.7
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 3.2e-63 245.4 171 69.0
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.2e-62 243.4 188 65.4
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 5.7e-60 234.6 166 72.9
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 7.5e-60 234.2 150 72.7
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 4.1e-58 228.4 134 83.6
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 3.5e-57 225.3 314 43.6
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.5e-57 224.9 155 69.0
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.0e-56 223.8 179 63.7
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.3e-56 223.4 142 76.1
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.5e-55 219.9 122 82.0
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 2.5e-55 219.2 157 68.2
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.2e-54 216.9 141 73.0
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.8e-54 215.7 157 63.7
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 6.6e-48 194.5 112 81.2
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 1.8e-45 186.4 308 39.9
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.0e-45 185.3 170 58.8
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 3.0e-40 169.1 222 46.4
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 6.2e-38 161.4 202 46.5
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 8.9e-29 131.0 84 77.4
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 4.4e-28 128.6 80 72.5
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.4e-28 128.6 76 76.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.7e-24 116.7 66 81.8
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 8.9e-21 104.4 76 64.5
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 5.6e-15 85.1 44 81.8
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.4e-13 80.5 88 47.7
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 6.9e-13 78.2 69 52.2
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.7e-11 73.6 44 77.3
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.2e-10 69.3 39 79.5
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.2e-09 67.4 125 35.2
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 2.8e-06 56.2 47 61.7


User provided reference genes

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