Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.4e-143 512.3 289 100.0
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 5.4e-135 484.6 289 88.9
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 1.3e-112 410.2 290 77.9
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.4e-111 406.8 292 76.0
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 1.8e-109 399.8 290 76.2
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 2.1e-107 392.9 290 74.8
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 5.5e-103 378.3 287 79.8
Peaxi162Scf01026g00254 Petunia axillaris HOM05D003500 ORTHO05D003919 1.9e-92 343.2 268 78.0
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 2.2e-51 206.8 303 43.9
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 8.9e-45 184.9 305 40.3
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 1.6e-41 174.1 290 41.0
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 1.0e-40 171.4 290 41.4
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.5e-39 166.8 300 37.7
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 4.4e-36 156.0 295 39.7
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 5.4e-34 149.1 299 35.8
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.7e-32 144.1 300 35.3
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 3.3e-31 139.8 303 37.3
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 7.5e-28 128.6 307 35.2
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 2.9e-27 126.7 298 32.6
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.9e-27 126.7 272 36.8
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.4e-26 123.6 300 33.0
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 4.6e-25 119.4 273 34.8
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 6.0e-25 119.0 303 34.0
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 7.8e-25 118.6 300 32.0
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 3.9e-24 116.3 316 32.3
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.2e-22 111.3 305 31.8
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 2.8e-22 110.2 293 29.0
Sopen06g004460 Solanum pennellii HOM05D003500 ORTHO05D003919 4.7e-22 109.4 69 79.7
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 1.1e-21 108.2 293 31.4
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.1e-21 106.7 293 30.4
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 5.2e-21 105.9 298 33.6
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 5.2e-21 105.9 308 33.4
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 8.9e-21 105.1 309 32.7
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.7e-19 100.9 292 30.5
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.2e-19 100.5 292 31.8
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 3.7e-19 99.8 288 33.0
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 4.9e-19 99.4 319 30.7
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 4.9e-19 99.4 354 28.5
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 6.4e-19 99.0 301 29.6
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.9e-18 97.4 302 32.5
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 2.4e-18 97.1 303 30.0
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 4.1e-18 96.3 359 27.3
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.1e-18 95.5 299 30.1
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.2e-17 94.7 302 28.8
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.1e-17 94.0 294 30.6
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 2.7e-17 93.6 292 30.5
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 6.0e-17 92.4 289 32.2
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 1.3e-16 91.3 296 28.4
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 1.3e-16 91.3 225 34.2
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 8.6e-16 88.6 293 30.0
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 8.6e-16 88.6 288 29.2
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 1.9e-15 87.4 308 29.9
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 2.5e-15 87.0 295 28.1
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 2.5e-15 87.0 300 27.7
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 2.5e-15 87.0 292 28.4
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 3.3e-15 86.7 292 31.8
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 4.3e-15 86.3 298 29.2
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 5.6e-15 85.9 294 33.3
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 5.6e-15 85.9 300 27.7
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 7.3e-15 85.5 305 29.8
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 9.6e-15 85.1 292 29.1
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 9.6e-15 85.1 292 29.1
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 9.6e-15 85.1 302 28.8
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.2e-14 84.7 285 28.8
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.2e-14 84.7 290 30.0
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 2.8e-14 83.6 302 29.5
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 2.8e-14 83.6 302 28.5
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 8.1e-14 82.0 293 28.3
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 8.1e-14 82.0 295 28.5
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 1.1e-13 81.6 283 27.9
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.1e-13 81.6 295 30.5
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.4e-13 80.5 290 28.3
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 2.4e-13 80.5 293 27.0
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.4e-13 80.5 287 29.3
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 3.1e-13 80.1 295 29.5
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 4.0e-13 79.7 297 27.6
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 4.0e-13 79.7 299 29.4
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 8.9e-13 78.6 290 27.9
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 1.2e-12 78.2 287 25.1
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 2.0e-12 77.4 287 27.5
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 2.0e-12 77.4 275 28.7
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 5.8e-12 75.9 289 25.6
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 9.9e-12 75.1 295 27.8
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 9.9e-12 75.1 287 28.6
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.3e-11 74.7 287 28.6
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.7e-11 74.3 291 28.5
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 2.2e-11 73.9 343 25.9
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 2.2e-11 73.9 282 29.4
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 2.9e-11 73.6 279 26.5
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 3.8e-11 73.2 303 28.4
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 4.9e-11 72.8 292 29.5
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 6.4e-11 72.4 289 26.3
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 8.4e-11 72.0 186 31.7
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.4e-10 69.3 299 28.4
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.7e-09 67.0 291 27.5
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 3.5e-09 66.6 287 26.1
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 4.6e-09 66.2 292 28.4
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 6.0e-09 65.9 293 26.3
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 6.0e-09 65.9 279 26.2
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 7.8e-09 65.5 286 25.9
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 7.8e-09 65.5 286 25.9
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 1.7e-08 64.3 306 27.1
Nn2g11771 Nelumbo nucifera HOM05D003500 ORTHO05D003919 3.0e-08 63.5 183 32.2
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 3.0e-08 63.5 284 26.1
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 1.5e-07 61.2 281 25.3
unitig_32.g11118 Utricularia gibba HOM05D003500 ORTHO05D003919 1.5e-07 61.2 298 26.8
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 2.5e-07 60.5 195 28.2
Cpa.g.sc205.12 Carica papaya HOM05D003500 ORTHO05D003919 3.3e-07 60.1 64 56.2
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 4.3e-07 59.7 321 26.5
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 5.6e-07 59.3 297 26.3
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 5.6e-07 59.3 298 28.5
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 7.3e-07 58.9 296 23.0
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 9.6e-07 58.5 162 29.0
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 9.6e-07 58.5 298 25.5
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 9.6e-07 58.5 292 26.0
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 2.8e-06 57.0 292 27.7
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.8e-06 57.0 300 27.0
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 6.2e-06 55.8 288 26.7
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 8.1e-06 55.5 134 28.4


User provided reference genes

Program Settings