Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000250g0090 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.4e-101 372.9 180 100.0
Nitab4.5_0002393g0010 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.4e-101 372.9 180 100.0
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 1.5e-98 362.8 180 97.8
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 1.5e-98 362.8 180 97.8
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 3.6e-97 358.2 180 95.6
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 3.1e-96 355.1 180 94.4
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 6.9e-96 354.0 180 93.3
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 9.0e-96 353.6 180 94.4
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 1.2e-95 353.2 180 93.9
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 3.4e-95 351.7 180 93.9
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 4.5e-95 351.3 180 93.3
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 5.8e-95 350.9 179 92.7
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 9.9e-95 350.1 180 93.3
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 9.9e-95 350.1 180 92.8
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 9.9e-95 350.1 180 92.8
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 9.9e-95 350.1 180 92.2
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 1.3e-94 349.7 180 93.3
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 1.7e-94 349.4 180 91.7
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 1.7e-94 349.4 180 92.2
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 1.7e-94 349.4 180 92.2
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 1.7e-94 349.4 180 92.8
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 2.2e-94 349.0 180 92.8
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 2.9e-94 348.6 180 92.8
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 2.9e-94 348.6 180 92.8
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 4.9e-94 347.8 180 91.7
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 6.4e-94 347.4 180 92.2
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 6.4e-94 347.4 180 92.8
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 6.4e-94 347.4 180 92.8
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 6.4e-94 347.4 180 92.8
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 6.4e-94 347.4 180 92.2
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 8.4e-94 347.1 179 91.6
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 1.1e-93 346.7 180 92.2
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 1.9e-93 345.9 180 92.2
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 1.9e-93 345.9 180 91.1
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 1.9e-93 345.9 180 91.7
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 5.4e-93 344.4 180 91.7
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 5.4e-93 344.4 180 90.6
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 5.4e-93 344.4 180 91.1
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 1.2e-92 343.2 180 90.0
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 1.6e-92 342.8 181 91.7
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.6e-92 342.8 180 90.6
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 1.6e-92 342.8 180 90.6
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 2.7e-92 342.0 180 91.7
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 3.5e-92 341.7 180 90.6
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 6.0e-92 340.9 180 91.1
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 1.0e-91 340.1 180 90.6
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 6.7e-91 337.4 179 89.4
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.9e-90 335.9 191 85.9
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 2.5e-90 335.5 180 90.6
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 9.6e-90 333.6 181 89.0
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 1.3e-89 333.2 180 88.3
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 8.1e-89 330.5 170 92.9
Ah.12g060330 Amaranthus hybridus HOM05D004019 ORTHO05D005136 1.1e-88 330.1 180 86.1
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 3.1e-88 328.6 180 85.6
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 6.9e-88 327.4 180 85.6
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 2.0e-87 325.9 180 85.0
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 3.4e-87 325.1 180 87.8
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 7.6e-87 323.9 180 86.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 9.9e-87 323.6 180 85.6
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 9.9e-87 323.6 180 85.6
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 1.3e-86 323.2 180 87.2
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 1.3e-86 323.2 180 83.9
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 2.2e-86 322.4 177 85.3
Os01g0593000 Oryza sativa ssp. japonica HOM05D004019 ORTHO05D005136 6.4e-86 320.9 180 84.4
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 2.4e-85 318.9 180 86.1
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 4.2e-85 318.2 180 85.6
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 1.2e-84 316.6 180 84.4
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 1.2e-84 316.6 180 86.1
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 1.6e-84 316.2 180 84.4
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 7.9e-84 313.9 180 84.4
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 5.1e-83 311.2 179 80.4
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 5.6e-82 307.8 159 92.5
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 1.6e-81 306.2 180 83.3
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 1.6e-81 306.2 180 83.3
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 3.7e-81 305.1 158 91.1
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 8.1e-81 303.9 248 64.1
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 1.8e-80 302.8 180 82.8
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 1.8e-80 302.8 180 82.8
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 3.1e-80 302.0 159 90.6
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 5.3e-80 301.2 158 91.1
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 6.5e-78 294.3 166 84.9
SEGI_29718 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 2.7e-76 288.9 158 86.1
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 1.0e-75 287.0 155 90.3
DCAR_006257 Daucus carota HOM05D004019 ORTHO05D005136 3.9e-75 285.0 151 92.7
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 7.4e-74 280.8 195 73.8
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 1.8e-72 276.2 178 71.9
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 2.2e-65 252.7 170 67.6
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 2.8e-65 252.3 177 68.4
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 2.8e-65 252.3 186 72.6
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 3.4e-63 245.4 177 67.8
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 1.7e-62 243.0 177 61.6
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 4.2e-61 238.4 126 88.9
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 2.8e-41 172.6 116 76.7
Haze_21651 Corylus avellana HOM05D004019 ORTHO05D005136 8.6e-14 81.3 47 80.9
DCAR_006256 Daucus carota HOM05D004019 ORTHO05D005136 2.4e-08 63.2 30 83.3
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 9.2e-08 61.2 30 76.7
PRCOL_00001920 Prasinoderma coloniale HOM05D004019 ORTHO05D005136 7.8e-07 58.2 141 32.6
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 6.6e-06 55.1 30 73.3


User provided reference genes

Program Settings