Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.9e-153 545.8 277 100.0
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.7e-141 506.1 293 90.4
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 1.4e-119 433.3 306 77.8
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 5.4e-116 421.4 281 82.2
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 1.8e-111 406.4 302 72.8
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.9e-92 343.2 286 66.4
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 2.7e-91 339.3 291 62.9
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 4.6e-91 338.6 288 64.6
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.7e-90 336.7 284 63.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 6.6e-90 334.7 283 62.9
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 5.6e-89 331.6 299 59.5
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 9.6e-89 330.9 286 62.6
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 2.8e-88 329.3 283 64.3
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 4.8e-88 328.6 291 62.9
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 2.4e-87 326.2 303 60.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.2e-86 323.9 289 62.6
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 1.5e-86 323.6 300 60.3
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.0e-86 323.2 279 63.1
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 2.6e-86 322.8 291 62.5
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 3.4e-86 322.4 284 62.7
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 4.4e-86 322.0 291 62.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 4.4e-86 322.0 285 62.5
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 9.9e-86 320.9 278 61.9
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 1.7e-85 320.1 282 59.9
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 2.9e-85 319.3 293 61.4
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.9e-85 319.3 294 60.2
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 4.9e-85 318.5 287 61.0
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 1.1e-84 317.4 280 60.7
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.4e-84 317.0 276 62.3
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 3.2e-84 315.8 284 61.6
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 3.2e-84 315.8 348 54.0
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 3.2e-84 315.8 293 60.1
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.2e-84 315.5 299 60.5
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 7.1e-84 314.7 290 63.4
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 1.6e-83 313.5 293 60.1
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.6e-83 313.5 296 60.8
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.7e-83 312.8 280 59.3
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 4.6e-83 312.0 280 62.5
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 4.6e-83 312.0 286 62.2
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 6.0e-83 311.6 287 61.0
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 6.0e-83 311.6 287 58.9
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.0e-82 310.8 282 61.3
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.0e-82 310.8 279 61.6
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.7e-82 310.1 291 59.8
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.3e-82 309.7 284 58.8
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 3.0e-82 309.3 299 58.5
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 3.9e-82 308.9 291 58.4
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 6.6e-82 308.1 287 58.2
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 6.6e-82 308.1 286 60.5
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 8.7e-82 307.8 286 60.1
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.5e-81 307.0 287 59.2
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.9e-81 306.6 291 59.1
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 1.9e-81 306.6 298 57.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.5e-81 306.2 275 61.1
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 3.3e-81 305.8 277 59.2
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 7.4e-81 304.7 291 59.8
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 1.3e-80 303.9 277 59.9
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.3e-80 303.9 289 59.2
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 1.3e-80 303.9 287 59.9
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 1.6e-80 303.5 287 59.6
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 2.1e-80 303.1 287 57.8
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 4.0e-79 298.9 259 62.9
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 6.9e-79 298.1 293 58.4
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 9.0e-79 297.7 279 58.1
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 9.0e-79 297.7 286 59.8
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 9.0e-79 297.7 279 58.8
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.2e-78 297.4 317 55.2
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 1.5e-78 297.0 292 56.8
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.0e-78 296.6 284 58.8
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.0e-78 296.6 289 58.5
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.4e-78 295.8 284 58.1
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.8e-78 295.0 317 54.9
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 2.2e-77 293.1 279 60.6
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 4.9e-77 292.0 315 53.7
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 4.9e-77 292.0 211 73.9
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.4e-77 291.6 270 58.9
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 6.4e-77 291.6 288 57.3
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.4e-76 290.4 282 57.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 7.1e-76 288.1 297 54.9
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 1.6e-75 287.0 291 55.7
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 6.0e-75 285.0 277 58.1
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 6.0e-75 285.0 291 55.7
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 6.0e-75 285.0 295 55.9
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 7.9e-75 284.6 277 56.7
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 7.9e-75 284.6 242 61.6
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 2.5e-73 279.6 281 56.6
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.3e-72 277.3 298 57.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 3.7e-72 275.8 291 55.0
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.4e-71 273.9 292 55.5
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 2.4e-71 273.1 290 54.8
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.3e-71 271.9 327 51.1
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 9.0e-71 271.2 280 53.6
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.7e-67 259.6 278 53.2
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 4.8e-64 248.8 305 49.8
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 4.8e-64 248.8 278 52.9
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 2.4e-63 246.5 242 57.0
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 4.5e-62 242.3 198 65.2
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 4.2e-60 235.7 295 49.2
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 5.1e-58 228.8 281 48.0
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 7.4e-57 224.9 178 65.2
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.1e-55 221.1 230 53.5
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.2e-53 213.4 187 61.0
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 7.9e-51 204.9 124 79.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.5e-49 200.7 176 64.8
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.7e-48 197.2 169 63.3
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 7.7e-46 188.3 302 42.4
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 7.9e-43 178.3 156 60.9
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.0e-42 177.9 290 40.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 8.8e-42 174.9 158 62.7
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 8.8e-42 174.9 154 62.3
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 9.7e-41 171.4 161 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.0e-38 163.7 278 35.6
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 1.5e-36 157.5 201 48.8
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-36 157.5 158 58.2
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 7.2e-36 155.2 297 37.0
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 8.0e-35 151.8 280 34.6
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.3e-33 146.4 292 36.6
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 4.2e-28 129.4 125 55.2
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.1e-27 127.1 86 69.8
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 8.3e-24 115.2 112 56.2
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 2.4e-23 113.6 151 50.3
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 6.1e-19 99.0 81 63.0
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 3.0e-18 96.7 96 59.4
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 6.8e-18 95.5 260 34.6
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.7e-16 89.7 57 80.7
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 4.9e-16 89.4 82 61.0
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 6.3e-16 89.0 93 59.1
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.1e-15 88.2 249 31.7
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 5.4e-15 85.9 68 63.2
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 9.2e-15 85.1 152 42.1
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.7e-13 80.9 306 25.8
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.2e-09 68.2 90 52.2
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.2e-06 58.2 190 27.9


User provided reference genes

Program Settings