Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.7e-191 672.5 341 100.0
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.2e-128 463.8 356 74.2
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 1.9e-110 403.3 584 47.3
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 1.9e-110 403.3 584 47.3
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 1.9e-110 403.3 584 47.3
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 6.6e-108 394.8 584 46.9
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.1e-93 346.7 586 40.8
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 3.5e-93 345.9 582 40.7
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 4.6e-93 345.5 584 41.1
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.3e-92 344.0 586 41.0
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 1.3e-92 344.0 583 40.8
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 1.3e-92 344.0 586 41.3
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 3.9e-92 342.4 585 41.0
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 3.3e-91 339.3 586 40.3
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 3.7e-90 335.9 580 40.0
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 3.7e-90 335.9 585 40.0
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 1.1e-89 334.3 586 39.9
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 1.8e-89 333.6 590 40.2
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 3.1e-89 332.8 586 39.6
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.1e-89 332.4 589 39.7
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 5.3e-89 332.0 587 39.9
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 6.9e-89 331.6 586 40.6
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 1.2e-88 330.9 591 39.8
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.2e-88 330.9 586 39.9
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 1.5e-88 330.5 589 39.7
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.4e-88 329.3 586 39.2
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.4e-88 329.3 586 39.4
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 5.9e-88 328.6 586 39.6
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 7.6e-88 328.2 586 39.8
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 1.7e-87 327.0 589 40.6
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 2.2e-87 326.6 256 70.3
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 2.2e-87 326.6 586 39.9
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 2.9e-87 326.2 547 41.0
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 8.5e-87 324.7 592 39.2
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 1.9e-86 323.6 584 39.0
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 1.9e-86 323.6 590 39.3
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 2.5e-86 323.2 585 38.8
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 5.5e-86 322.0 588 39.3
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 7.2e-86 321.6 588 38.6
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 9.3e-86 321.2 615 37.9
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 2.7e-85 319.7 585 39.0
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.6e-85 318.9 586 38.9
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.0e-84 317.8 594 38.6
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 1.3e-84 317.4 586 38.2
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 3.9e-84 315.8 586 38.1
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 6.7e-84 315.1 587 38.5
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 1.5e-83 313.9 585 37.9
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 2.5e-83 313.2 581 38.7
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 2.5e-83 313.2 581 38.7
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 2.5e-83 313.2 586 38.7
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 5.7e-83 312.0 583 38.9
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 7.4e-83 311.6 254 67.7
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 9.7e-83 311.2 589 38.0
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 2.2e-82 310.1 585 37.9
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 3.7e-82 309.3 581 38.0
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 3.7e-82 309.3 582 38.1
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 3.7e-82 309.3 582 38.0
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 6.3e-82 308.5 581 38.4
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 1.1e-81 307.8 581 38.2
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 1.1e-81 307.8 583 38.3
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 1.4e-81 307.4 581 38.0
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 1.4e-81 307.4 254 68.1
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 1.8e-81 307.0 590 38.3
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.8e-81 307.0 581 37.9
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 2.4e-81 306.6 581 38.0
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 3.1e-81 306.2 587 38.5
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 6.9e-81 305.1 583 37.7
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 9.0e-81 304.7 581 38.4
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.2e-80 304.3 585 37.8
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 1.5e-80 303.9 585 37.9
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 2.0e-80 303.5 581 37.7
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 2.0e-80 303.5 585 37.1
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 3.4e-80 302.8 544 39.7
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 4.5e-80 302.4 589 37.9
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 7.7e-80 301.6 584 38.5
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 7.7e-80 301.6 637 36.9
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 1.0e-79 301.2 581 38.2
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 1.0e-79 301.2 581 37.7
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 6.5e-79 298.5 565 37.5
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 6.5e-79 298.5 593 37.1
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 8.5e-79 298.1 581 38.0
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 8.5e-79 298.1 255 68.2
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 1.9e-78 297.0 576 37.7
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 2.5e-78 296.6 582 37.6
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 4.2e-78 295.8 256 65.6
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 2.1e-77 293.5 585 37.6
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 2.1e-77 293.5 254 64.2
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 4.6e-77 292.4 587 36.8
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 4.6e-77 292.4 574 37.8
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 1.0e-76 291.2 542 37.6
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 1.0e-76 291.2 588 37.4
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 2.3e-76 290.0 588 37.4
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 3.9e-76 289.3 254 62.6
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 6.7e-76 288.5 542 37.5
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 1.1e-75 287.7 558 36.9
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 1.7e-74 283.9 584 35.4
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 6.3e-74 282.0 526 39.5
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 6.3e-74 282.0 607 36.2
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.1e-73 281.2 253 62.8
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 5.3e-73 278.9 541 36.6
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 5.3e-73 278.9 615 34.3
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 9.1e-73 278.1 584 36.3
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 5.9e-72 275.4 565 37.2
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 5.0e-71 272.3 591 35.5
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 5.0e-71 272.3 526 37.6
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 3.6e-69 266.2 541 36.2
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 2.2e-66 256.9 269 56.5
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 7.2e-62 241.9 584 36.3
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 1.6e-61 240.7 271 53.5
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 1.3e-55 221.1 666 32.0
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 3.7e-50 203.0 452 35.0
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 7.2e-46 188.7 214 48.1
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.3e-44 183.7 239 48.5
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 2.0e-43 180.6 126 78.6
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 9.8e-43 178.3 241 45.2
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 2.2e-42 177.2 223 47.1
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 1.9e-38 164.1 117 76.9
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 2.5e-38 163.7 324 38.3
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 2.1e-37 160.6 428 31.3
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 1.0e-36 158.3 106 80.2
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 4.1e-33 146.4 205 39.5
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.6e-32 144.4 408 30.6
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.0e-27 127.5 92 70.7
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 6.6e-23 112.5 72 69.4
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 3.3e-22 110.2 150 51.3
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 9.5e-22 108.6 74 68.9
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 3.1e-20 103.6 257 35.4
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.7e-18 97.8 229 32.8
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.7e-18 96.7 68 76.5
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.3e-18 95.5 68 76.5
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 1.0e-15 88.6 51 72.5
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 3.0e-15 87.0 51 70.6
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.6e-13 81.3 56 78.6
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 6.2e-13 79.3 191 33.0
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 4.0e-12 76.6 203 31.0


User provided reference genes

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