Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 3.1e-47 191.4 94 100.0
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.9e-44 182.2 90 100.0
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 1.4e-39 166.0 90 90.0
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 1.8e-39 165.6 90 90.0
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 9.9e-38 159.8 85 90.6
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 4.8e-32 141.0 90 78.9
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 4.5e-30 134.4 93 68.8
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 4.9e-29 131.0 90 74.4
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 4.9e-29 131.0 90 71.1
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 8.4e-29 130.2 89 70.8
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.1e-28 129.8 85 70.6
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 3.2e-28 128.3 83 72.3
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 4.2e-28 127.9 92 66.3
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 2.1e-27 125.6 83 71.1
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 4.6e-27 124.4 89 66.3
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 6.0e-27 124.0 69 87.0
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 6.0e-27 124.0 69 87.0
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 6.0e-27 124.0 84 69.0
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 1.0e-26 123.2 85 67.1
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 1.0e-26 123.2 89 66.3
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 1.8e-26 122.5 86 65.1
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.8e-26 122.5 86 65.1
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 3.0e-26 121.7 83 67.5
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 3.0e-26 121.7 85 68.2
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 3.9e-26 121.3 86 64.0
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 6.7e-26 120.6 90 65.6
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 8.7e-26 120.2 87 64.4
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 1.5e-25 119.4 93 62.4
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 2.5e-25 118.6 83 67.5
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 4.3e-25 117.9 87 63.2
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 4.3e-25 117.9 89 62.9
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 5.6e-25 117.5 83 69.9
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 7.4e-25 117.1 85 62.4
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 9.6e-25 116.7 89 60.7
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.8e-24 115.2 83 65.1
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 4.8e-24 114.4 82 65.9
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 4.8e-24 114.4 82 67.1
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 6.2e-24 114.0 85 64.7
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 6.2e-24 114.0 85 63.5
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 1.1e-23 113.2 120 49.2
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 1.1e-23 113.2 89 62.9
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.1e-23 113.2 82 65.9
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 1.1e-23 113.2 90 61.1
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.1e-23 113.2 83 65.1
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 1.8e-23 112.5 92 63.0
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 2.4e-23 112.1 84 66.7
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 2.4e-23 112.1 84 66.7
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 2.4e-23 112.1 83 65.1
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 3.1e-23 111.7 90 61.1
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 5.3e-23 110.9 86 62.8
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 5.3e-23 110.9 86 62.8
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 6.9e-23 110.5 71 74.6
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 6.9e-23 110.5 77 67.5
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 9.0e-23 110.2 90 60.0
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 9.0e-23 110.2 89 61.8
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 1.2e-22 109.8 92 62.0
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 2.0e-22 109.0 83 62.7
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 2.6e-22 108.6 90 58.9
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 3.4e-22 108.2 93 58.1
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.4e-22 108.2 83 62.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 5.8e-22 107.5 90 60.0
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 7.6e-22 107.1 89 60.7
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 7.6e-22 107.1 86 60.5
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 7.6e-22 107.1 83 61.4
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 1.0e-21 106.7 89 57.3
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.0e-21 106.7 92 56.5
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.3e-21 106.3 85 61.2
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.3e-21 106.3 91 57.1
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 1.7e-21 105.9 85 60.0
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 2.2e-21 105.5 85 60.0
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 2.2e-21 105.5 86 61.6
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 2.9e-21 105.1 83 60.2
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 4.9e-21 104.4 85 60.0
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 1.4e-20 102.8 89 59.6
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 2.5e-20 102.1 74 62.2
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 3.2e-20 101.7 85 60.0
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 3.2e-20 101.7 89 59.6
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 2.1e-19 99.0 63 68.3
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 4.6e-19 97.8 56 76.8
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 6.7e-18 94.0 52 78.8
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 6.7e-18 94.0 83 50.6
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.7e-18 93.6 54 74.1
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 8.7e-18 93.6 83 51.8
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 1.5e-17 92.8 83 55.4
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.5e-17 92.8 83 55.4
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 1.5e-17 92.8 83 55.4
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.5e-17 92.8 83 55.4
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 1.9e-17 92.4 88 52.3
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 3.3e-17 91.7 71 59.2
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 3.3e-17 91.7 83 54.2
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 3.3e-17 91.7 102 48.0
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 1.6e-16 89.4 72 59.7
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 4.8e-16 87.8 83 53.0
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 6.3e-16 87.4 52 76.9
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 1.4e-15 86.3 51 72.5
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 2.2e-13 79.0 68 52.9
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 3.2e-12 75.1 45 68.9
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 2.0e-09 65.9 62 53.2
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 7.4e-09 63.9 54 57.4
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 3.7e-08 61.6 76 48.7
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 2.0e-06 55.8 30 83.3


User provided reference genes

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