Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 8.7e-231 803.5 480 100.0
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-208 729.9 485 91.5
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 8.1e-152 541.2 514 67.3
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.0e-146 524.2 489 66.5
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.1e-120 436.8 444 61.5
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.2e-101 373.6 443 58.9
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.7e-91 339.3 515 46.4
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 8.0e-91 338.6 516 51.4
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 4.8e-88 329.3 513 46.0
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-84 318.2 516 47.1
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.5e-81 307.8 513 46.2
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 1.4e-79 301.2 485 45.6
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 4.5e-78 296.2 489 46.0
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 4.7e-75 286.2 519 42.2
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.7e-72 276.6 512 44.3
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.9e-72 276.2 512 45.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.9e-72 276.2 506 42.7
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 6.3e-72 275.8 491 44.2
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.1e-71 275.0 515 47.0
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 4.1e-71 273.1 491 44.2
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.0e-69 268.5 515 43.3
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.8e-69 266.5 506 45.3
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.2e-67 261.5 504 43.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.6e-67 261.2 464 44.0
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 2.8e-67 260.4 500 42.6
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.8e-66 257.7 535 44.5
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 3.0e-66 256.9 497 41.0
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 2.6e-65 253.8 508 44.7
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 5.4e-63 246.1 501 41.9
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 7.0e-63 245.7 481 43.0
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 5.9e-62 242.7 520 40.0
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.9e-60 237.7 505 40.6
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.3e-60 235.7 492 41.7
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.2e-59 232.6 475 41.3
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 3.1e-58 230.3 509 39.1
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 8.9e-58 228.8 490 40.4
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.4e-57 226.9 485 46.0
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.9e-56 223.0 499 42.3
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.1e-55 221.9 479 40.7
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.4e-55 221.5 483 46.4
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.9e-55 221.1 498 40.4
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.4e-55 220.7 507 41.8
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 4.6e-54 216.5 480 44.0
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 4.6e-54 216.5 503 38.6
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 6.0e-54 216.1 436 40.6
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 3.9e-53 213.4 495 41.6
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 3.9e-53 213.4 495 41.6
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 6.6e-53 212.6 499 38.3
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 6.6e-53 212.6 452 39.8
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.6e-51 208.0 531 36.9
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.1e-51 207.6 519 38.9
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.0e-50 203.4 286 49.3
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.0e-49 201.1 501 38.1
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.7e-48 198.0 520 37.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 6.4e-48 196.1 451 43.0
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 8.3e-48 195.7 354 45.5
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.1e-46 191.0 460 41.5
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.5e-46 190.3 464 39.2
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 9.5e-44 182.2 497 36.8
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.6e-43 181.4 463 42.1
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.6e-43 181.4 439 38.0
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 2.1e-43 181.0 405 45.4
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.6e-43 180.3 462 37.9
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 3.6e-43 180.3 457 36.5
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.2e-43 179.5 499 36.9
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 8.1e-43 179.1 320 44.4
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 1.1e-42 178.7 386 40.4
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.8e-42 177.9 504 36.9
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 2.3e-42 177.6 320 44.4
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 4.0e-42 176.8 543 34.3
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 8.9e-42 175.6 458 36.7
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.5e-41 174.9 524 34.5
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.6e-41 174.1 487 35.5
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 9.9e-41 172.2 122 76.2
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 2.2e-40 171.0 479 35.7
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 3.7e-40 170.2 449 40.1
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 8.4e-40 169.1 513 33.1
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 2.4e-39 167.5 485 39.0
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.2e-39 167.2 496 35.1
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 3.5e-38 163.7 622 31.5
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 4.6e-38 163.3 521 36.5
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.7e-37 161.4 228 52.6
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.5e-36 158.3 194 50.0
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.6e-36 155.6 493 35.5
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 3.6e-35 153.7 457 36.8
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.8e-34 151.4 464 32.5
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.8e-34 151.4 457 34.1
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.1e-34 150.6 489 40.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 4.0e-34 150.2 485 35.1
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 4.0e-34 150.2 492 34.8
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.2e-33 148.7 340 37.4
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 2.0e-33 147.9 482 34.9
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.4e-33 146.7 173 53.8
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.3e-32 145.2 330 38.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 2.9e-32 144.1 492 33.1
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.1e-31 142.1 457 33.9
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.9e-31 141.4 199 49.2
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 3.9e-29 133.7 445 33.3
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 3.9e-29 133.7 455 33.2
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 4.8e-27 126.7 450 32.9
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 8.1e-27 125.9 476 35.7
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 6.9e-26 122.9 360 34.7
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.4e-25 120.2 371 33.4
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 5.8e-25 119.8 455 32.1
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 2.2e-24 117.9 448 31.2
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.9e-24 117.5 326 36.5
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.8e-24 117.1 323 36.8
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 3.2e-23 114.0 479 31.5
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.0e-21 109.0 147 47.6
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 1.0e-21 109.0 441 35.4
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 2.5e-20 104.4 573 33.3
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 9.6e-20 102.4 113 51.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 9.6e-20 102.4 173 43.4
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.1e-19 101.3 71 73.2
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 9.0e-18 95.9 77 68.8
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.7e-16 91.7 444 29.7
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.7e-16 91.7 444 29.7
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.6e-11 75.1 63 63.5
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 2.5e-07 61.2 331 29.3
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 4.6e-06 57.0 106 37.7


User provided reference genes

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