Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 3.5e-203 711.4 370 100.0
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.3e-189 666.4 370 94.6
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.3e-149 533.5 381 76.6
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.0e-133 480.7 373 73.2
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 2.7e-131 472.6 373 71.8
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.8e-127 459.9 373 70.5
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.5e-84 314.7 373 50.7
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.2e-83 314.3 361 52.6
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.6e-83 312.8 380 49.7
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.2e-83 312.0 380 49.7
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 8.0e-83 311.6 380 50.5
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.8e-82 310.5 380 50.3
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 4.0e-82 309.3 382 49.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 3.4e-81 306.2 348 52.3
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 7.5e-81 305.1 374 49.5
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 7.5e-81 305.1 381 49.1
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.3e-80 304.3 381 49.3
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.9e-79 300.4 374 48.9
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.9e-79 300.4 381 48.8
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 7.0e-79 298.5 329 53.8
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 7.8e-78 295.0 377 49.1
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 6.6e-77 292.0 337 51.3
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.9e-76 290.4 384 46.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.8e-74 283.9 385 46.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.2e-73 281.2 376 47.1
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 2.9e-72 276.6 365 47.7
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 2.4e-71 273.5 382 44.5
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.2e-71 273.1 344 46.8
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.2e-71 273.1 373 45.3
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 9.2e-71 271.6 344 46.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 2.7e-70 270.0 378 42.9
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.7e-70 270.0 376 42.8
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 3.5e-70 269.6 376 43.9
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.3e-69 267.7 375 43.2
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 1.7e-69 267.3 373 44.8
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 2.3e-69 266.9 377 46.7
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.3e-69 266.9 344 45.9
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.0e-69 266.5 380 45.0
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 6.6e-69 265.4 379 43.3
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.5e-68 264.2 381 43.6
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.5e-68 263.5 381 44.6
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 5.6e-68 262.3 379 43.3
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 9.5e-68 261.5 371 42.3
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.1e-67 260.4 368 47.0
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.1e-66 258.1 356 46.3
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 3.4e-65 253.1 330 47.9
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 4.9e-64 249.2 368 42.7
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 2.4e-63 246.9 372 42.7
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 2.4e-63 246.9 347 42.7
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.6e-62 244.2 375 41.9
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 4.6e-62 242.7 376 41.8
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.8e-62 241.9 345 43.5
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.3e-60 236.5 336 44.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 4.3e-60 236.1 380 41.1
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.6e-59 234.2 342 43.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 2.8e-59 233.4 366 42.3
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.4e-58 231.1 368 41.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.1e-58 229.9 276 51.4
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 5.8e-57 225.7 292 49.7
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.7e-56 224.2 343 38.8
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.7e-56 224.2 361 40.4
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 4.9e-56 222.6 365 38.9
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 8.4e-56 221.9 339 42.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 9.3e-55 218.4 351 42.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 6.0e-54 215.7 329 42.2
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 3.0e-53 213.4 261 49.4
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 6.6e-53 212.2 261 49.0
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.9e-52 210.7 364 39.0
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 4.3e-52 209.5 274 48.5
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.6e-49 200.3 351 38.7
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.6e-49 200.3 351 38.7
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.7e-48 197.6 384 37.5
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 8.4e-48 195.3 321 42.4
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.6e-46 191.0 317 42.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.3e-45 188.0 278 44.2
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 7.4e-44 182.2 270 43.7
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.8e-43 180.3 362 38.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 6.2e-43 179.1 276 43.1
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 8.1e-43 178.7 221 48.9
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 1.2e-41 174.9 353 34.8
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.0e-41 174.1 357 34.7
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 7.6e-41 172.2 270 40.4
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-39 168.3 362 36.7
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.4e-39 167.2 362 36.7
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.1e-36 158.3 297 39.1
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 7.4e-36 155.6 203 49.8
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 3.7e-35 153.3 222 45.0
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 9.0e-34 148.7 372 31.2
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.9e-32 143.7 375 31.2
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 4.9e-32 142.9 369 31.4
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 4.9e-32 142.9 371 31.5
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 1.1e-31 141.7 359 31.5
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 4.2e-31 139.8 166 45.8
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 5.5e-31 139.4 369 31.2
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.0e-29 135.2 371 30.2
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.8e-29 134.4 371 30.2
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.8e-29 134.4 371 30.2
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 1.5e-28 131.3 371 29.4
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.5e-28 130.6 371 29.4
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 7.4e-28 129.0 359 30.1
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 4.8e-27 126.3 152 48.0
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 8.4e-24 115.5 316 29.1
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 1.1e-23 115.2 311 30.5
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 6.1e-22 109.4 251 34.3
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 7.9e-22 109.0 328 29.9
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.3e-19 101.7 272 30.5
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 2.8e-19 100.5 303 29.0
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.2e-17 95.1 142 40.1
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 3.4e-17 93.6 297 27.3
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 5.0e-16 89.7 81 50.6
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.2e-15 87.0 330 27.0
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 7.2e-15 85.9 250 30.4
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 9.4e-15 85.5 131 37.4
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 9.4e-15 85.5 131 37.4
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 2.9e-08 63.9 70 50.0


User provided reference genes

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