Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000235g0150 Nicotiana tabacum HOM05D011531 ORTHO05D012843 2.1e-59 232.3 123 100.0
Nitab4.5_0004435g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 5.1e-58 227.6 123 96.7
Nitab4.5_0000235g0160 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.5e-57 226.1 123 97.6
Nitab4.5_0000188g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 2.1e-51 205.7 123 88.6
Nitab4.5_0018599g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.5e-51 204.9 123 88.6
Nitab4.5_0003371g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 8.7e-50 200.3 123 86.2
Nitab4.5_0001223g0060 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.6e-48 194.9 123 82.1
Nitab4.5_0009492g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.7e-32 141.7 111 68.5
CAN.G424.67 Capsicum annuum HOM05D011531 ORTHO05D012843 6.0e-27 124.4 123 61.0
Sopen02g024380 Solanum pennellii HOM05D011531 ORTHO05D012843 6.5e-21 104.4 118 56.8
PGSC0003DMG400045733 Solanum tuberosum HOM05D011531 ORTHO05D012843 2.5e-20 102.4 118 56.8
PGSC0003DMG400013878 Solanum tuberosum HOM05D011531 ORTHO05D012843 1.6e-19 99.8 84 64.3
Nitab4.5_0009438g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 4.6e-19 98.2 59 81.4
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 1.0e-13 80.5 97 48.5
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 1.3e-13 80.1 108 45.4
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 1.3e-13 80.1 97 48.5
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.2e-13 79.3 124 42.7
Peaxi162Scf00610g00115 Petunia axillaris HOM05D000519 ORTHO05D000959 2.2e-13 79.3 97 46.4
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.9e-13 79.0 83 49.4
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 2.9e-13 79.0 97 47.4
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 2.9e-13 79.0 97 48.5
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 3.8e-13 78.6 97 47.4
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 6.5e-13 77.8 97 46.4
PGSC0003DMG400022338 Solanum tuberosum HOM05D011531 ORTHO05D012843 4.2e-12 75.1 64 60.9
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 9.4e-12 73.9 97 47.4
Nitab4.5_0000143g0140 Nicotiana tabacum HOM05D000519 ORTHO05D016886 3.6e-11 72.0 140 38.6
Nitab4.5_0003626g0060 Nicotiana tabacum HOM05D015638 ORTHO05D016886 3.6e-11 72.0 138 36.2
Sopen10g033250 Solanum pennellii HOM05D011531 ORTHO05D393179 3.6e-11 72.0 122 36.1
Nitab4.5_0007568g0010 Nicotiana tabacum HOM05D015638 ORTHO05D016886 7.9e-11 70.9 138 37.0
Sopen11g007140 Solanum pennellii HOM05D000519 ORTHO05D000959 3.0e-10 68.9 112 40.2
Nitab4.5_0000132g0460 Nicotiana tabacum HOM05D011531 ORTHO05D000959 3.9e-10 68.6 109 41.3
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 6.7e-10 67.8 92 42.4
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.5e-09 66.6 99 41.4
Solyc05g054120.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 2.0e-09 66.2 98 43.9
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 2.6e-09 65.9 116 37.9
CAN.G1186.46 Capsicum annuum HOM05D015638 ORTHO05D016886 4.4e-09 65.1 127 37.0
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 5.7e-09 64.7 76 47.4
Solyc11g012385.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 5.7e-09 64.7 112 38.4
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.4e-09 64.3 98 40.8
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.4e-09 64.3 98 40.8
SalBow8G0429 Salvia bowleyana HOM05D000519 ORTHO05D000959 7.4e-09 64.3 102 42.2
Medtr4g095630 Medicago truncatula HOM05D000519 ORTHO05D000959 9.7e-09 63.9 96 40.6
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 1.7e-08 63.2 99 39.4
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 1.7e-08 63.2 99 39.4
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 2.2e-08 62.8 124 37.9
ClCG01G010530 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.2e-08 62.8 87 36.8
TPR.G5977 Trifolium pratense HOM05D000519 ORTHO05D000959 2.2e-08 62.8 100 42.0
Prupe.4G008900 Prunus persica HOM05D000519 ORTHO05D000959 2.8e-08 62.4 92 44.6
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 2.8e-08 62.4 114 40.4
PGSC0003DMG400008460 Solanum tuberosum HOM05D000519 ORTHO05D000959 2.8e-08 62.4 102 41.2
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.8e-08 62.4 61 52.5
ClCG01G010520 Citrullus lanatus HOM05D000519 ORTHO05D000959 3.7e-08 62.0 97 34.0
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 3.7e-08 62.0 108 38.0
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 4.8e-08 61.6 76 42.1
CAN.G696.24 Capsicum annuum HOM05D000519 ORTHO05D000959 4.8e-08 61.6 112 39.3
CAN.G696.25 Capsicum annuum HOM05D000519 ORTHO05D000959 4.8e-08 61.6 112 39.3
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 4.8e-08 61.6 123 38.2
ClCG01G010440 Citrullus lanatus HOM05D000519 ORTHO05D000959 4.8e-08 61.6 89 36.0
Migut.M01408 Erythranthe guttata HOM05D000519 ORTHO05D000959 6.3e-08 61.2 86 40.7
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 6.3e-08 61.2 92 43.5
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 8.2e-08 60.8 99 35.4
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 8.2e-08 60.8 124 34.7
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 8.2e-08 60.8 84 36.9
ClCG01G010470 Citrullus lanatus HOM05D000519 ORTHO05D000959 1.1e-07 60.5 97 34.0
Glyma.07G266000 Glycine max HOM05D000519 ORTHO05D000959 1.1e-07 60.5 83 42.2
Peaxi162Scf00610g00125 Petunia axillaris HOM05D000519 ORTHO05D000959 1.1e-07 60.5 73 47.9
Sopen05g032610 Solanum pennellii HOM05D000519 ORTHO05D000959 1.1e-07 60.5 98 41.8
Ciclev10009506m.g Citrus clementina HOM05D000519 ORTHO05D000959 1.4e-07 60.1 83 38.6
Oeu009403.1 Olea europaea HOM05D020212 ORTHO05D012843 1.4e-07 60.1 115 36.5
TPR.G21872 Trifolium pratense HOM05D000519 ORTHO05D000959 1.4e-07 60.1 108 36.1
HPP92_024483 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.8e-07 59.7 73 46.6
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 2.4e-07 59.3 91 36.3
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 2.4e-07 59.3 110 37.3
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 2.4e-07 59.3 107 36.4
ClCG01G010490 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.4e-07 59.3 97 33.0
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.4e-07 59.3 61 52.5
TPR.G5936 Trifolium pratense HOM05D000919 ORTHO05D001187 2.4e-07 59.3 78 43.6
HPP92_014276 Vanilla planifolia HOM05D000519 ORTHO05D000959 2.4e-07 59.3 89 43.8
CAN.G1529.1 Capsicum annuum HOM05D000519 ORTHO05D000959 3.1e-07 58.9 99 39.4
Oeu009402.1 Olea europaea HOM05D020212 ORTHO05D012843 3.1e-07 58.9 115 36.5
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 3.1e-07 58.9 122 37.7
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 4.1e-07 58.5 96 40.6
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 4.1e-07 58.5 89 42.7
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 5.3e-07 58.2 88 37.5
Dinv13973 Davidia involucrata HOM05D000519 ORTHO05D000959 5.3e-07 58.2 75 41.3
HanXRQChr17g0544761 Helianthus annuus HOM05D000519 ORTHO05D000959 5.3e-07 58.2 117 35.9
Lalb_Chr15g0088031 Lupinus albus HOM05D000519 ORTHO05D000959 5.3e-07 58.2 114 35.1
Peaxi162Scf00924g00021 Petunia axillaris HOM05D000519 ORTHO05D000959 5.3e-07 58.2 118 37.3
CSS0049006 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.0e-07 57.8 101 34.7
Lalb_Chr18g0057041 Lupinus albus HOM05D000519 ORTHO05D000959 7.0e-07 57.8 86 39.5
THA.LOC104821295 Tarenaya hassleriana HOM05D003002 ORTHO05D000959 7.0e-07 57.8 80 40.0
Ca_00730_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 9.1e-07 57.4 112 36.6
CsaV3_1G017120 Cucumis sativus L. HOM05D000519 ORTHO05D000959 9.1e-07 57.4 96 34.4
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 9.1e-07 57.4 86 41.9
Nn5g27763 Nelumbo nucifera HOM05D000519 ORTHO05D000959 9.1e-07 57.4 111 35.1
PGSC0003DMG400047215 Solanum tuberosum HOM05D000519 ORTHO05D000959 9.1e-07 57.4 122 35.2
TPR.G35340 Trifolium pratense HOM05D000519 ORTHO05D000959 9.1e-07 57.4 68 45.6
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 1.2e-06 57.0 76 39.5
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 1.2e-06 57.0 76 39.5
CAN.G370.1 Capsicum annuum HOM05D000519 ORTHO05D000959 1.2e-06 57.0 123 32.5
MELO3C025554.2 Cucumis melo HOM05D000519 ORTHO05D000959 1.2e-06 57.0 116 33.6
Lj6g0022755 Lotus japonicus HOM05D000519 ORTHO05D000959 1.2e-06 57.0 80 41.2
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.2e-06 57.0 90 42.2
Nn5g27758 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.2e-06 57.0 92 37.0
Potri.006G014500 Populus trichocarpa HOM05D000519 ORTHO05D000959 1.2e-06 57.0 111 36.9
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 1.5e-06 56.6 76 39.5
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 1.5e-06 56.6 76 39.5
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 1.5e-06 56.6 91 40.7
Nn5g27762 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.5e-06 56.6 113 33.6
Psat4g004160 Pisum sativum HOM05D000519 ORTHO05D000959 1.5e-06 56.6 76 39.5
SGA_v2.0_scaffold4G01865 Striga asiatica HOM05D000919 ORTHO05D001187 1.5e-06 56.6 89 39.3
COL.COLO4_31900 Corchorus olitorius HOM05D000919 ORTHO05D001187 2.0e-06 56.2 87 39.1
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 2.0e-06 56.2 94 38.3
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 2.0e-06 56.2 120 35.8
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 2.0e-06 56.2 101 34.7
Medtr8g079410 Medicago truncatula HOM05D000519 ORTHO05D000959 2.0e-06 56.2 85 37.6
Ah.08g216340 Amaranthus hybridus HOM05D000519 ORTHO05D000959 2.6e-06 55.8 83 42.2
arahy.Tifrunner.gnm1.ann1.QX2NVJ Arachis hypogaea HOM05D000519 ORTHO05D000959 2.6e-06 55.8 96 37.5
HanXRQChr17g0559581 Helianthus annuus HOM05D000519 ORTHO05D000959 2.6e-06 55.8 89 38.2
TPR.G21870 Trifolium pratense HOM05D000519 ORTHO05D000959 2.6e-06 55.8 68 44.1
TPR.G33246 Trifolium pratense HOM05D000519 ORTHO05D000959 2.6e-06 55.8 82 40.2
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 3.4e-06 55.5 88 37.5
PGR042G1719 Punica granatum HOM05D000519 ORTHO05D000959 3.4e-06 55.5 61 47.5
Sopen04g006910 Solanum pennellii HOM05D000519 ORTHO05D000959 3.4e-06 55.5 122 33.6
Sopen11g007130 Solanum pennellii HOM05D015638 ORTHO05D016886 3.4e-06 55.5 131 35.9
TPR.G945 Trifolium pratense HOM05D000519 ORTHO05D000959 3.4e-06 55.5 87 42.5
CAN.G1263.18 Capsicum annuum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 85 41.2
CAN.G64.23 Capsicum annuum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 125 36.8
Migut.I00372 Erythranthe guttata HOM05D000519 ORTHO05D000959 4.5e-06 55.1 62 48.4
FvH4_3g00830 Fragaria vesca HOM05D000519 ORTHO05D000959 4.5e-06 55.1 86 40.7
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 4.5e-06 55.1 88 36.4
Solyc04g014780.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 122 36.1
TPR.G35897 Trifolium pratense HOM05D000519 ORTHO05D000959 4.5e-06 55.1 85 41.2
CAN.G1263.17 Capsicum annuum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 113 37.2
CsaV3_1G017110 Cucumis sativus L. HOM05D000519 ORTHO05D000959 5.9e-06 54.7 76 36.8
Gohir.A06G154000 Gossypium hirsutum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 104 39.4
Gohir.A06G154100 Gossypium hirsutum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 103 36.9
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 5.9e-06 54.7 107 39.3
Peaxi162Scf00352g00051 Petunia axillaris HOM05D015638 ORTHO05D016886 5.9e-06 54.7 92 42.4
Aqoxy1G04041 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 7.7e-06 54.3 99 35.4
Gorai.010G187500 Gossypium raimondii HOM05D000519 ORTHO05D000959 7.7e-06 54.3 101 33.7
SalBow8G0930 Salvia bowleyana HOM05D000519 ORTHO05D000959 7.7e-06 54.3 118 33.9


User provided reference genes

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