Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000235g0070 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.7e-99 365.9 171 100.0
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.5e-96 353.6 170 95.9
Nitab4.5_0024891g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.0e-94 347.1 170 94.7
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.0e-92 342.4 170 92.9
Nitab4.5_0001955g0130 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.6e-73 279.6 170 81.2
Nitab4.5_0000522g0120 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.8e-69 266.2 135 91.9
Nitab4.5_0021888g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.8e-69 266.2 163 80.4
Nitab4.5_0000235g0080 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.5e-57 225.3 108 94.4
Nitab4.5_0020532g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.5e-55 217.2 170 62.9
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 4.1e-50 201.8 146 67.1
Nitab4.5_0007424g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.6e-46 188.7 108 80.6
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 2.7e-41 172.6 155 52.3
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 3.0e-40 169.1 169 45.0
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-40 168.3 169 45.0
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 8.7e-40 167.5 169 45.0
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 8.7e-40 167.5 169 45.0
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-39 167.2 169 43.8
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-39 167.2 169 45.0
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-39 166.8 159 49.1
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-38 163.3 169 43.8
Nitab4.5_0000157g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.1e-38 162.9 96 80.2
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-38 162.5 160 44.4
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-37 160.6 160 46.2
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-37 160.2 77 93.5
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.8e-37 159.8 169 43.2
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.6e-36 156.0 108 70.4
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 3.4e-36 155.6 157 44.6
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 7.6e-36 154.5 170 44.7
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 7.6e-36 154.5 165 46.7
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.7e-35 153.3 165 44.8
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 4.9e-35 151.8 160 42.5
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.4e-34 150.2 165 46.1
Nitab4.5_0026367g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.6e-32 141.4 75 88.0
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 8.7e-32 141.0 141 44.0
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 3.6e-30 135.6 139 43.2
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 4.8e-30 135.2 138 44.2
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-28 129.0 153 39.2
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.4e-27 124.8 153 38.6
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 7.1e-26 121.3 113 46.9
Nitab4.5_0000445g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-25 120.6 72 76.4
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-25 119.0 108 44.4
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-24 117.1 108 44.4
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-24 116.7 108 43.5
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-24 116.7 108 43.5
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.7e-24 114.4 122 44.3
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-23 113.2 108 43.5
Nitab4.5_0001339g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-23 112.5 138 39.1
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-21 107.5 113 44.2
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-21 107.5 130 40.8
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-21 106.7 97 45.4
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-21 106.7 110 44.5
Sopen05g014240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.4e-21 106.3 171 33.9
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-21 105.5 159 35.8
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.0e-21 104.4 113 42.5
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 3.4e-20 102.4 167 32.9
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-19 100.1 116 44.0
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.7e-19 100.1 110 42.7
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-18 97.1 125 38.4
Nitab4.5_0003734g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.2e-18 95.9 161 31.1
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 3.2e-18 95.9 129 37.2
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 3.2e-18 95.9 125 39.2
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 7.1e-18 94.7 125 38.4
Nitab4.5_0003114g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-17 94.0 137 38.0
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 1.6e-17 93.6 125 37.6
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-17 93.2 113 39.8
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 2.1e-17 93.2 120 39.2
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 2.1e-17 93.2 117 40.2
Sopen00g005910 Solanum pennellii HOM05D002047 ORTHO05D001422 3.5e-17 92.4 121 38.8
Sopen09g018960 Solanum pennellii HOM05D002047 ORTHO05D001422 3.5e-17 92.4 121 38.8
Sopen07g016250 Solanum pennellii HOM05D002047 ORTHO05D001422 7.9e-17 91.3 121 37.2
Nitab4.5_0003519g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-16 90.9 130 34.6
Sopen01g017700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-16 90.5 120 36.7
Sopen01g024730 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-16 89.4 121 38.0
Sopen06g009860 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-16 89.4 121 37.2
Sopen11g022360 Solanum pennellii HOM05D007487 ORTHO05D008561 3.0e-16 89.4 125 40.0
Sopen07g008910 Solanum pennellii HOM05D007487 ORTHO05D008561 3.9e-16 89.0 145 36.6
Sopen09g024660 Solanum pennellii HOM05D002047 ORTHO05D001422 3.9e-16 89.0 72 59.7
Sopen06g009410 Solanum pennellii HOM05D007487 ORTHO05D008561 6.7e-16 88.2 125 40.0
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 6.7e-16 88.2 125 36.0
Sopen02g010520 Solanum pennellii HOM05D007487 ORTHO05D008561 1.1e-15 87.4 125 40.8
Sopen07g011120 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-15 87.4 121 38.0
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-15 87.0 142 31.7
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-15 87.0 97 41.2
Sopen05g027550 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-15 87.0 125 39.2
Sopen05g014630 Solanum pennellii HOM05D007487 ORTHO05D008561 1.9e-15 86.7 125 40.8
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-15 86.3 112 39.3
Sopen08g023600 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-15 86.3 125 39.2
Sopen05g014650 Solanum pennellii HOM05D007487 ORTHO05D008561 3.3e-15 85.9 125 39.2
Sopen01g015240 Solanum pennellii HOM05D007487 ORTHO05D008561 4.3e-15 85.5 125 39.2
Sopen01g024270 Solanum pennellii HOM05D002047 ORTHO05D001422 4.3e-15 85.5 127 33.9
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 4.3e-15 85.5 122 37.7
Nitab4.5_0006110g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-15 85.1 130 33.8
Nitab4.5_0009584g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-15 85.1 85 42.4
Sopen01g017210 Solanum pennellii HOM05D000047 ORTHO05D001422 5.7e-15 85.1 75 42.7
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 5.7e-15 85.1 128 35.2
Sopen06g012970 Solanum pennellii HOM05D007487 ORTHO05D008561 5.7e-15 85.1 129 36.4
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-15 84.7 80 42.5
Sopen08g007700 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-15 84.7 120 38.3
Nitab4.5_0000039g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-15 84.3 168 31.0
Nitab4.5_0001871g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.3e-14 84.0 49 73.5
Nitab4.5_0004456g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-14 83.6 130 33.8
Nitab4.5_0011907g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-14 83.6 129 32.6
Sopen01g024350 Solanum pennellii HOM05D000004 ORTHO05D001422 1.6e-14 83.6 125 32.8
Nitab4.5_0008253g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.8e-14 82.0 168 27.4
Sopen06g007780 Solanum pennellii HOM05D009746 ORTHO05D008561 4.8e-14 82.0 117 38.5
CAN.G574.11 Capsicum annuum HOM05D000265 ORTHO05D001422 8.2e-14 81.3 85 44.7
Sopen06g021480 Solanum pennellii HOM05D009746 ORTHO05D008561 8.2e-14 81.3 120 37.5
Sopen01g011270 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-13 80.9 128 38.3
Nitab4.5_0012693g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-13 80.5 130 34.6
Sopen04g023360 Solanum pennellii HOM05D007487 ORTHO05D008561 1.8e-13 80.1 142 33.8
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-13 79.7 110 36.4
PGSC0003DMG400026889 Solanum tuberosum HOM05D007487 ORTHO05D008561 4.1e-13 79.0 116 37.1
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-13 78.6 130 32.3
Sopen01g022050 Solanum pennellii HOM05D000014 ORTHO05D000589 5.3e-13 78.6 128 35.9
Nitab4.5_0000955g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.0e-13 77.8 135 37.0
Nitab4.5_0018015g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.0e-13 77.8 100 36.0
Sopen03g020240 Solanum pennellii HOM05D000047 ORTHO05D000589 9.0e-13 77.8 125 36.0
Sopen12g014280 Solanum pennellii HOM05D000182 ORTHO05D001422 9.0e-13 77.8 109 38.5
Nitab4.5_0002106g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-12 77.4 85 41.2
Nitab4.5_0009951g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.0e-12 76.6 130 32.3
PGSC0003DMG400027483 Solanum tuberosum HOM05D009746 ORTHO05D008561 2.6e-12 76.3 126 33.3
Dinv11092 Davidia involucrata HOM05D012821 ORTHO05D001422 4.5e-12 75.5 121 33.9
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 4.5e-12 75.5 61 54.1
Sopen12g018750 Solanum pennellii HOM05D007487 ORTHO05D008561 4.5e-12 75.5 125 37.6
Nitab4.5_0003806g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-12 75.1 73 49.3
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 5.8e-12 75.1 91 40.7
Sopen05g013010 Solanum pennellii HOM05D007487 ORTHO05D008561 2.2e-11 73.2 128 35.2
Dinv04834 Davidia involucrata HOM05D012821 ORTHO05D001422 5.0e-11 72.0 161 27.3
Nitab4.5_0001049g0170 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.0e-11 72.0 85 37.6
Nitab4.5_0000093g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.5e-11 71.6 117 34.2
Sopen01g041930 Solanum pennellii HOM05D007487 ORTHO05D008561 8.4e-11 71.2 84 42.9
Sopen08g015380 Solanum pennellii HOM05D007487 ORTHO05D000002 1.4e-10 70.5 86 44.2
Sopen02g012040 Solanum pennellii HOM05D007487 ORTHO05D008561 4.2e-10 68.9 113 36.3
Dinv15606 Davidia involucrata HOM05D012821 ORTHO05D001422 5.5e-10 68.6 117 32.5
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 5.5e-10 68.6 75 42.7
Sopen12g013390 Solanum pennellii HOM05D000047 ORTHO05D008561 5.5e-10 68.6 117 36.8
Sopen01g006870 Solanum pennellii HOM05D002047 ORTHO05D001422 7.1e-10 68.2 76 43.4
Sopen02g001540 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-10 68.2 112 35.7
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-09 67.4 124 30.6
CAN.G165.21 Capsicum annuum HOM05D000117 ORTHO05D001422 1.6e-09 67.0 107 36.4
Nitab4.5_0005441g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-09 67.0 66 45.5
Sopen05g021440 Solanum pennellii HOM05D000047 ORTHO05D001422 1.6e-09 67.0 94 37.2
Cc00_g02530 Coffea canephora HOM05D008695 ORTHO05D001422 2.7e-09 66.2 117 29.9
Nitab4.5_0000605g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.1e-09 65.1 119 31.9
Nitab4.5_0005093g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.1e-09 65.1 87 35.6
Nitab4.5_0009951g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-09 64.7 85 38.8
Sopen05g015790 Solanum pennellii HOM05D002047 ORTHO05D001422 7.9e-09 64.7 145 31.0
Sopen01g024220 Solanum pennellii HOM05D007487 ORTHO05D008561 3.9e-08 62.4 75 41.3
Sopen03g020230 Solanum pennellii HOM05D000047 ORTHO05D009630 5.1e-08 62.0 65 40.0
Nitab4.5_0002031g0140 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-08 61.2 127 28.3
Sopen11g011080 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-07 60.8 77 44.2
Sopen07g005430 Solanum pennellii HOM05D009746 ORTHO05D008561 1.5e-07 60.5 43 53.5
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-07 59.7 143 27.3
Nitab4.5_0010052g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-07 59.7 66 39.4
Sopen01g018230 Solanum pennellii HOM05D002047 ORTHO05D001422 2.5e-07 59.7 103 35.0
Nitab4.5_0002183g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-07 59.3 87 35.6
Sopen05g011250 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-07 59.3 42 54.8
Nitab4.5_0001431g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-07 58.9 111 28.8
Sopen01g020100 Solanum pennellii HOM05D007487 ORTHO05D008561 4.3e-07 58.9 76 40.8
Sopen07g016170 Solanum pennellii HOM05D007487 ORTHO05D008561 4.3e-07 58.9 43 51.2
Sopen09g019170 Solanum pennellii HOM05D007487 ORTHO05D008561 4.3e-07 58.9 77 41.6
QL04p096945 Quercus lobata HOM05D013472 ORTHO05D002983 5.7e-07 58.5 119 33.6
Sopen09g019420 Solanum pennellii HOM05D000047 ORTHO05D000589 5.7e-07 58.5 43 53.5
Sopen01g015110 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-07 57.8 77 39.0
Dinv23016 Davidia involucrata HOM05D012821 ORTHO05D001422 1.3e-06 57.4 96 36.5
Nitab4.5_0000765g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.3e-06 57.4 73 41.1
Nitab4.5_0001407g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.3e-06 57.4 74 40.5
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-06 57.4 71 39.4
Sopen12g023040 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 57.4 58 41.4
Sopen07g017450 Solanum pennellii HOM05D008695 ORTHO05D001422 2.8e-06 56.2 62 46.8
Sopen02g001670 Solanum pennellii HOM05D007487 ORTHO05D008561 4.8e-06 55.5 38 55.3
Sopen10g022490 Solanum pennellii HOM05D007487 ORTHO05D008561 6.3e-06 55.1 78 39.7
Nitab4.5_0002276g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.2e-06 54.7 42 47.6
Sopen09g025290 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 54.7 38 52.6


User provided reference genes

Program Settings