Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000232g0320 Nicotiana tabacum HOM05D000132 ORTHO05D000058 5.6e-77 290.8 141 100.0
PGSC0003DMG400027968 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.7e-25 119.8 85 71.8
Solyc04g074020.2 Solanum lycopersicum HOM05D000132 ORTHO05D000058 1.0e-22 110.5 68 77.9
Solyc04g074030.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 4.4e-21 105.1 65 76.9
Nitab4.5_0022359g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.0e-17 94.0 69 72.5
CAN.G792.57 Capsicum annuum HOM05D000132 ORTHO05D000058 9.4e-16 87.4 71 66.2
Nitab4.5_0006076g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 3.6e-15 85.5 65 67.7
Solyc04g074000.3 Solanum lycopersicum HOM05D000132 ORTHO05D000058 3.6e-15 85.5 52 76.9
Solyc04g074050.4 Solanum lycopersicum HOM05D000132 ORTHO05D000058 3.6e-15 85.5 52 76.9
CSS0049686 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D000058 6.1e-15 84.7 115 42.6
Sopen04g029230 Solanum pennellii HOM05D000132 ORTHO05D000058 7.9e-15 84.3 52 76.9
Nitab4.5_0005157g0010 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.0e-14 84.0 65 67.7
PGSC0003DMG400011989 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.1e-13 80.5 52 75.0
PGSC0003DMG401006401 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.1e-13 80.5 52 73.1
Sopen04g029220 Solanum pennellii HOM05D000132 ORTHO05D000058 2.0e-13 79.7 47 78.7
Sopen04g029260 Solanum pennellii HOM05D000132 ORTHO05D000058 4.4e-13 78.6 52 75.0
CAN.G2748.2 Capsicum annuum HOM05D000132 ORTHO05D000058 5.7e-13 78.2 52 71.2
CAN.G101.11 Capsicum annuum HOM05D000132 ORTHO05D000058 2.2e-12 76.3 64 64.1
Peaxi162Scf00041g01422 Petunia axillaris HOM05D000132 ORTHO05D000058 2.8e-12 75.9 67 59.7
PGSC0003DMG401021514 Solanum tuberosum HOM05D000132 ORTHO05D000058 8.2e-12 74.3 52 71.2
CAN.G101.13 Capsicum annuum HOM05D000132 ORTHO05D000058 1.4e-11 73.6 153 36.6
CAN.G517.2 Capsicum annuum HOM05D000132 ORTHO05D000058 3.1e-11 72.4 52 67.3
PGSC0003DMG400027967 Solanum tuberosum HOM05D000132 ORTHO05D000058 4.1e-11 72.0 52 69.2
PGSC0003DMG400027971 Solanum tuberosum HOM05D000132 ORTHO05D000058 4.1e-11 72.0 52 69.2
CAN.G1836.1 Capsicum annuum HOM05D000132 ORTHO05D000058 5.3e-11 71.6 54 64.8
PGSC0003DMG400017713 Solanum tuberosum HOM05D000132 ORTHO05D000058 7.0e-11 71.2 52 67.3
CAN.G101.36 Capsicum annuum HOM05D000132 ORTHO05D000058 9.1e-11 70.9 99 43.4
Lj3A498T23 Lonicera japonica HOM05D000132 ORTHO05D000058 9.1e-11 70.9 131 36.6
FvH4_4g04540 Fragaria vesca HOM05D000132 ORTHO05D000058 1.6e-10 70.1 88 42.0
Dinv00834 Davidia involucrata HOM05D000132 ORTHO05D000058 2.0e-10 69.7 87 48.3
CAN.G792.55 Capsicum annuum HOM05D000132 ORTHO05D000058 2.6e-10 69.3 53 67.9
Nitab4.5_0000232g0330 Nicotiana tabacum HOM05D000132 ORTHO05D000058 5.9e-10 68.2 52 67.3
PGSC0003DMG400012992 Solanum tuberosum HOM05D000132 ORTHO05D000058 1.3e-09 67.0 54 63.0
Nitab4.5_0001307g0030 Nicotiana tabacum HOM05D000132 ORTHO05D000058 1.7e-09 66.6 52 69.2
PGSC0003DMG400017716 Solanum tuberosum HOM05D000132 ORTHO05D000058 2.2e-09 66.2 51 62.7
Nitab4.5_0000232g0270 Nicotiana tabacum HOM05D000132 ORTHO05D000058 5.0e-09 65.1 52 67.3
CAN.G101.32 Capsicum annuum HOM05D000132 ORTHO05D000058 8.5e-09 64.3 52 65.4
CAN.G2870.1 Capsicum annuum HOM05D000132 ORTHO05D000058 8.5e-09 64.3 52 65.4
RcHm_v2.0_Chr4g0409921 Rosa chinensis HOM05D000132 ORTHO05D000058 8.5e-09 64.3 84 42.9
CAN.G193.27 Capsicum annuum HOM05D000132 ORTHO05D000058 1.1e-08 63.9 52 63.5
CAN.G792.58 Capsicum annuum HOM05D000132 ORTHO05D000058 2.5e-08 62.8 53 66.0
Dinv23935 Davidia involucrata HOM05D000132 ORTHO05D000058 2.5e-08 62.8 76 47.4
FAN25G3225 Fragaria x ananassa HOM05D000132 ORTHO05D000058 4.2e-08 62.0 87 43.7
Lj1C1104G4 Lonicera japonica HOM05D000132 ORTHO05D000058 9.4e-08 60.8 82 46.3
FAN16G3584 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.2e-07 60.5 87 42.5
Dinv00835 Davidia involucrata HOM05D000132 ORTHO05D000058 2.1e-07 59.7 73 46.6
Dinv13019 Davidia involucrata HOM05D000132 ORTHO05D000058 2.1e-07 59.7 73 46.6
CSS0030997 Camellia sinensis var. sinensis HOM05D000132 ORTHO05D020264 1.0e-06 57.4 115 33.9
PGSC0003DMG400017718 Solanum tuberosum HOM05D000132 ORTHO05D396511 2.3e-06 56.2 37 73.0
FvH4_3g14360 Fragaria vesca HOM05D000132 ORTHO05D000058 6.7e-06 54.7 87 39.1
Lsat_1_v5_gn_3_60480 Lactuca sativa HOM05D000132 ORTHO05D000058 6.7e-06 54.7 84 40.5


User provided reference genes

Program Settings