Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 4.9e-60 234.2 112 100.0
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.1e-54 216.5 109 94.5
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.7e-31 139.4 109 61.5
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 6.9e-30 134.0 108 57.4
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 9.1e-30 133.7 109 53.2
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 1.5e-29 132.9 108 57.4
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.0e-29 132.5 107 55.1
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 5.9e-29 131.0 111 55.0
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 7.7e-29 130.6 116 54.3
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 6.5e-28 127.5 109 56.0
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 6.5e-28 127.5 109 51.4
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 8.5e-28 127.1 114 45.6
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 1.1e-27 126.7 109 53.2
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.4e-27 126.3 110 52.7
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 1.9e-27 125.9 111 51.4
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 1.9e-27 125.9 109 52.3
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 5.5e-27 124.4 111 49.5
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 7.2e-27 124.0 108 50.0
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 9.4e-27 123.6 99 55.6
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 2.7e-26 122.1 107 47.7
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 6.1e-26 120.9 113 54.0
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.8e-25 119.4 109 49.5
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 8.8e-25 117.1 108 49.1
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 1.5e-24 116.3 109 45.9
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 2.0e-24 115.9 108 44.4
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 3.3e-24 115.2 109 45.0
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 4.4e-24 114.8 110 46.4
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 5.7e-24 114.4 109 48.6
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 9.7e-24 113.6 111 46.8
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 1.3e-23 113.2 112 45.5
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 1.3e-23 113.2 109 45.0
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 1.7e-23 112.8 110 48.2
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 2.2e-23 112.5 111 47.7
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.2e-23 112.5 111 47.7
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 2.8e-23 112.1 110 46.4
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 3.7e-23 111.7 109 45.0
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 3.7e-23 111.7 111 46.8
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 4.8e-23 111.3 107 49.5
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 6.3e-23 110.9 112 52.7
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 6.3e-23 110.9 112 46.4
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.4e-22 109.8 109 45.0
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.8e-22 109.4 110 45.5
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 4.1e-22 108.2 109 44.0
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 5.3e-22 107.8 111 45.0
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 9.1e-22 107.1 107 46.7
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 1.6e-21 106.3 112 45.5
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 2.0e-21 105.9 110 43.6
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 2.0e-21 105.9 110 44.5
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 2.6e-21 105.5 108 44.4
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 2.6e-21 105.5 108 44.4
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 2.6e-21 105.5 109 43.1
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 2.6e-21 105.5 109 43.1
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 2.6e-21 105.5 108 45.4
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 3.5e-21 105.1 110 42.7
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 3.5e-21 105.1 110 45.5
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 4.5e-21 104.8 109 43.1
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 4.5e-21 104.8 110 45.5
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 7.7e-21 104.0 112 44.6
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 7.7e-21 104.0 112 44.6
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 1.0e-20 103.6 110 43.6
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 1.3e-20 103.2 110 40.9
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 1.7e-20 102.8 113 44.2
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 1.7e-20 102.8 109 43.1
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 2.9e-20 102.1 110 46.4
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 2.9e-20 102.1 79 55.7
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 2.9e-20 102.1 110 40.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 3.8e-20 101.7 108 41.7
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 5.0e-20 101.3 111 42.3
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 6.5e-20 100.9 112 44.6
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 8.5e-20 100.5 110 40.9
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 8.5e-20 100.5 110 44.5
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 1.1e-19 100.1 109 42.2
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 1.1e-19 100.1 111 47.7
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 1.9e-19 99.4 112 44.6
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 2.5e-19 99.0 111 41.4
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 4.2e-19 98.2 99 46.5
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 4.2e-19 98.2 105 42.9
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 4.2e-19 98.2 109 41.3
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 7.2e-19 97.4 109 40.4
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 7.2e-19 97.4 108 43.5
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 1.2e-18 96.7 108 37.0
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 1.6e-18 96.3 109 40.4
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 3.6e-18 95.1 111 40.5
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 3.0e-17 92.0 111 37.8
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 3.0e-17 92.0 111 37.8
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 6.7e-17 90.9 108 40.7
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 2.2e-15 85.9 109 40.4
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 2.7e-13 79.0 58 70.7
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 2.7e-13 79.0 58 70.7
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.7e-12 76.3 65 46.2
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 2.9e-12 75.5 81 42.0
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 5.0e-12 74.7 68 45.6
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 8.5e-12 73.9 65 49.2
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 2.5e-11 72.4 66 45.5
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 7.2e-11 70.9 64 53.1
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 6.1e-10 67.8 108 35.2
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 1.0e-09 67.0 65 47.7
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 2.3e-09 65.9 68 45.6
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 7.0e-06 54.3 38 55.3


User provided reference genes

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