Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-143 510.8 265 100.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-60 236.5 285 49.1
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.8e-60 235.0 282 48.9
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-55 218.8 241 56.0
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-52 209.9 241 51.9
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.4e-50 201.8 245 49.8
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-48 196.8 241 49.4
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-45 187.2 239 46.4
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-43 179.1 165 66.7
Nitab4.5_0007565g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-41 171.4 240 49.2
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-39 165.6 281 39.5
Nitab4.5_0000138g0190 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-38 164.1 144 61.1
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-38 163.7 109 73.4
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-36 156.8 206 48.5
Nitab4.5_0005412g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-31 141.0 87 77.0
Nitab4.5_0013458g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-24 116.3 114 51.8
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.8e-21 106.7 296 28.7
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-21 106.7 293 28.7
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-20 102.8 276 30.4
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-19 101.3 243 29.6
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-18 97.1 281 29.5
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-18 96.7 193 32.1
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-18 96.3 180 33.3
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-18 95.5 112 49.1
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-17 94.4 108 45.4
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-17 94.4 111 45.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-17 93.6 142 38.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-17 92.0 191 38.7
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-17 91.7 111 44.1
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-17 91.7 111 43.2
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-16 90.9 239 28.0
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-16 89.0 255 29.0
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-15 87.4 171 33.9
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.0e-15 86.7 280 27.1
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-15 86.3 270 27.4
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-15 85.1 264 24.2
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-14 82.4 142 36.6
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.7e-14 81.6 255 26.7
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.7e-14 81.6 179 31.8
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-13 80.9 155 33.5
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-13 80.9 187 31.6
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-13 80.9 151 33.8
Nitab4.5_0000566g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-13 80.5 78 55.1
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-13 80.5 181 32.6
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-13 80.1 281 26.7
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-12 78.2 262 25.2
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-12 78.2 276 22.5
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-12 78.2 101 35.6
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-12 78.2 276 23.6
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-12 76.3 280 27.5
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.3e-12 75.9 179 30.2
Nitab4.5_0001410g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-12 75.9 55 72.7
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.9e-12 75.5 111 38.7
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.1e-12 75.1 92 41.3
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-11 74.3 276 22.5
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-11 73.9 265 25.7
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-11 73.2 150 31.3
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-11 72.8 100 43.0
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 71.2 182 30.2
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.7e-10 70.9 185 27.6
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.2e-10 70.5 275 25.1
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-10 69.7 190 28.9
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.5e-10 68.9 280 24.6
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-09 68.2 263 24.3
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-09 67.4 198 28.3
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-09 67.4 267 24.3
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-09 67.0 179 30.7
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-09 66.2 91 35.2
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.2e-09 66.2 177 29.4
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.2e-09 65.5 113 35.4
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.2e-09 65.5 272 26.1
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.4e-09 65.1 96 34.4
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-08 64.7 72 48.6
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-08 64.7 178 25.3
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-08 64.7 165 30.9
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-08 64.3 85 42.4
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 2.7e-08 63.5 94 29.8
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.6e-08 63.2 254 26.0
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-08 63.2 255 24.3
Nitab4.5_0001329g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-07 61.6 43 65.1
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-07 60.8 175 27.4
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-07 60.8 247 23.9
Nitab4.5_0000073g0520 Nicotiana tabacum HOM05D009153 ORTHO05D002765 3.0e-07 60.1 78 46.2
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-07 60.1 197 25.9
Nitab4.5_0001150g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-07 60.1 46 60.9
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-07 60.1 138 30.4
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-07 59.7 74 41.9
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-07 59.7 273 24.2
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 8.8e-07 58.5 301 20.6
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-07 58.5 188 27.7
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-06 57.8 93 30.1
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-06 57.8 260 22.7
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.0e-06 57.4 96 32.3
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-06 57.0 90 32.2
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 55.8 230 25.2
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.4e-06 55.5 259 23.9
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.7e-06 55.1 180 26.1


User provided reference genes

Program Settings