Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 2.7e-175 618.6 328 100.0
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 6.1e-175 617.5 328 99.7
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 3.3e-165 585.1 335 91.6
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 4.4e-165 584.7 335 91.6
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 7.4e-165 583.9 335 92.5
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 1.7e-145 519.6 335 80.3
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 5.0e-145 518.1 337 80.1
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 3.6e-143 511.9 339 79.9
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 1.2e-141 506.9 338 77.8
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 2.0e-141 506.1 308 83.4
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 1.8e-139 499.6 303 83.5
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 2.4e-139 499.2 329 77.8
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 2.4e-139 499.2 337 77.7
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 5.9e-138 494.6 336 78.9
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.7e-137 493.0 308 82.5
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 1.7e-137 493.0 335 76.1
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 6.6e-137 491.1 335 78.2
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 8.6e-137 490.7 330 78.2
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 1.1e-136 490.3 331 78.2
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 4.3e-136 488.4 338 77.8
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 5.6e-136 488.0 307 80.8
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 5.6e-136 488.0 307 80.5
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 5.6e-136 488.0 323 78.0
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.2e-135 486.9 334 77.8
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 1.2e-135 486.9 326 76.7
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.2e-135 486.9 336 75.6
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.2e-135 486.9 336 75.6
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 2.1e-135 486.1 329 76.9
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 4.7e-135 485.0 336 76.2
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 8.0e-135 484.2 290 84.5
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 6.8e-134 481.1 322 76.4
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 8.9e-134 480.7 327 76.1
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 8.9e-134 480.7 304 80.3
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.5e-133 479.9 307 79.8
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.5e-133 479.9 307 79.8
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 1.5e-133 479.9 297 81.8
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 2.0e-133 479.6 297 81.5
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 7.5e-133 477.6 304 78.6
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 7.5e-133 477.6 323 75.5
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.3e-132 476.9 335 74.0
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 1.7e-132 476.5 332 75.3
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 3.7e-132 475.3 353 71.4
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 4.9e-132 474.9 336 74.4
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 6.4e-132 474.6 287 82.2
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 6.4e-132 474.6 335 76.7
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 6.4e-132 474.6 335 73.4
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 1.4e-131 473.4 284 83.8
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 1.4e-131 473.4 336 74.7
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 3.2e-131 472.2 304 77.3
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 5.4e-131 471.5 299 79.3
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 9.2e-131 470.7 330 74.8
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.6e-130 469.9 305 78.4
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 1.6e-130 469.9 330 74.2
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 2.0e-130 469.5 303 82.2
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 2.7e-130 469.2 309 77.0
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 3.5e-130 468.8 305 78.4
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 4.6e-130 468.4 330 74.5
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 4.6e-130 468.4 311 77.2
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 7.8e-130 467.6 309 76.4
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 7.8e-130 467.6 336 72.9
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 2.3e-129 466.1 336 72.3
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 3.9e-129 465.3 309 76.1
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 6.6e-129 464.5 335 74.3
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 8.6e-129 464.2 310 78.7
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 1.1e-128 463.8 309 77.3
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 1.5e-128 463.4 335 71.9
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.9e-128 463.0 337 71.8
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 2.5e-128 462.6 337 71.8
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 4.3e-128 461.8 287 80.5
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 5.6e-128 461.5 245 93.1
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 5.6e-128 461.5 307 77.5
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 7.3e-128 461.1 337 71.8
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 9.5e-128 460.7 305 76.7
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 1.6e-127 459.9 336 72.3
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 2.1e-127 459.5 338 74.6
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 2.8e-127 459.1 307 75.6
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 4.7e-127 458.4 336 71.1
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 4.7e-127 458.4 336 71.1
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 4.7e-127 458.4 336 71.1
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 6.2e-127 458.0 335 71.9
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 6.2e-127 458.0 337 71.8
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 1.0e-126 457.2 335 71.6
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.4e-126 456.8 333 70.6
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.3e-126 456.1 336 70.8
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 4.0e-126 455.3 336 71.4
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 4.0e-126 455.3 336 70.8
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 4.0e-126 455.3 323 74.9
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 1.5e-125 453.4 335 70.7
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 1.5e-125 453.4 335 70.7
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 1.5e-125 453.4 335 70.7
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 5.8e-125 451.4 295 77.3
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 9.8e-125 450.7 331 71.3
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 2.2e-124 449.5 337 69.7
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 3.7e-124 448.7 329 71.7
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 6.4e-124 448.0 326 73.0
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 3.2e-123 445.7 276 79.3
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 5.4e-123 444.9 309 72.5
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 6.0e-122 441.4 290 76.9
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 7.8e-122 441.0 305 72.8
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 2.1e-119 433.0 361 65.1
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.8e-119 432.6 305 71.8
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 6.2e-119 431.4 292 75.7
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 3.1e-118 429.1 293 74.7
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 9.8e-117 424.1 322 69.9
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 2.2e-116 422.9 304 72.0
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 4.9e-116 421.8 286 75.2
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 8.3e-116 421.0 329 68.4
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 2.4e-115 419.5 351 66.7
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 5.4e-115 418.3 291 74.6
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 5.4e-115 418.3 278 74.5
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 3.0e-113 412.5 290 72.8
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 3.9e-113 412.1 300 68.0
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 5.1e-113 411.8 343 65.6
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 6.6e-113 411.4 316 71.5
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 4.3e-112 408.7 386 63.7
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.4e-110 403.7 327 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 5.8e-109 398.3 303 65.3
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 1.6e-106 390.2 303 64.7
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 2.3e-105 386.3 245 79.6
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 1.1e-104 384.0 215 94.9
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 4.3e-104 382.1 242 76.4
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 4.7e-103 378.6 296 65.5
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 8.1e-103 377.9 295 67.8
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.3e-100 370.5 335 63.9
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 8.7e-97 357.8 336 61.0
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.3e-96 355.5 336 58.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.3e-96 355.5 336 58.0
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.3e-92 344.0 276 68.5
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 4.9e-92 342.0 226 73.9
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 3.2e-91 339.3 206 77.2
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 5.4e-91 338.6 291 61.9
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 5.4e-91 338.6 305 61.3
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 7.4e-88 328.2 203 76.4
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 3.0e-73 279.6 197 71.1
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 5.7e-72 275.4 335 50.4
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.1e-71 273.5 210 71.4
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.5e-61 240.7 147 78.2
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.2e-59 233.0 245 56.7
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 2.2e-55 220.3 158 75.9
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 4.1e-46 189.5 150 70.0
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.0e-41 174.9 132 68.2
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 4.0e-33 146.4 80 81.2
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 3.1e-30 136.7 117 60.7
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 5.0e-28 129.4 110 67.3
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 5.5e-27 125.9 101 70.3
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.0e-25 121.7 94 75.5
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.8e-25 120.9 101 67.3
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 8.8e-25 118.6 299 27.8
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.2e-23 114.0 92 69.6
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 2.3e-20 104.0 77 66.2
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.5e-19 100.5 78 59.0
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 4.0e-17 93.2 101 60.4
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 6.8e-17 92.4 56 69.6
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.2e-15 87.4 85 60.0
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 2.9e-15 87.0 72 69.4
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 4.1e-14 83.2 69 68.1
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 7.0e-14 82.4 43 83.7
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 1.0e-12 78.6 64 70.3
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.8e-09 67.8 69 55.1


User provided reference genes

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