Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 0.0e+00 1077.0 518 100.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.5e-300 1035.4 518 96.1
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 7.4e-276 953.4 518 86.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.1e-274 948.0 523 88.9
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.0e-274 947.6 518 86.7
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 3.9e-269 931.0 588 77.6
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 5.3e-242 840.9 516 76.6
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.0e-240 836.6 521 76.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.7e-240 835.9 512 76.0
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.6e-236 822.0 520 74.6
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.4e-234 815.5 521 74.3
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 5.3e-234 814.3 521 73.7
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.0e-234 813.9 521 73.9
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.7e-233 812.0 521 74.1
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.9e-232 808.5 516 74.0
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.5e-232 807.4 518 75.9
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.6e-230 802.7 517 74.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.7e-230 802.0 512 75.2
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.0e-230 800.4 510 74.1
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.6e-228 795.4 510 73.5
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 4.8e-227 791.2 527 71.9
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.3e-227 790.8 519 73.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.4e-226 789.6 520 72.5
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 2.4e-226 788.9 510 72.2
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.1e-226 788.5 510 73.1
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 5.4e-226 787.7 519 73.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 7.0e-226 787.3 522 71.5
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 9.1e-226 786.9 510 73.7
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.2e-225 786.6 519 73.4
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.6e-225 786.2 519 73.2
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.6e-225 786.2 519 73.2
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.7e-225 785.4 514 74.5
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 4.5e-225 784.6 510 74.1
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.1e-223 780.0 499 72.7
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.5e-223 779.6 519 72.8
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.5e-223 778.9 498 74.1
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.5e-223 778.9 452 84.7
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.2e-223 777.3 519 71.9
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.2e-223 777.3 519 71.9
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 7.2e-223 777.3 531 71.8
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.6e-222 776.2 519 72.3
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 6.1e-222 774.2 530 70.9
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 2.3e-221 772.3 514 72.0
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.5e-220 769.6 512 72.1
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 5.7e-220 767.7 521 71.2
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 7.5e-220 767.3 512 72.1
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 9.8e-220 766.9 521 69.7
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 6.3e-219 764.2 551 67.0
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.0e-217 759.2 513 69.4
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 7.7e-217 757.3 522 69.3
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.3e-216 756.5 506 70.4
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.6e-216 754.2 521 68.9
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.5e-215 753.1 513 69.4
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 3.3e-215 751.9 508 70.1
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.3e-215 751.5 525 68.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.1e-214 749.2 509 69.7
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.8e-214 748.8 507 69.6
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 6.1e-214 747.7 518 69.3
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 8.0e-214 747.3 510 68.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.0e-213 746.9 511 70.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 2.3e-213 745.7 518 68.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 5.2e-213 744.6 516 69.6
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 6.8e-213 744.2 519 68.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.0e-212 742.7 514 69.1
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 4.4e-212 741.5 519 67.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 2.2e-211 739.2 505 69.7
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.9e-211 738.8 516 68.8
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 8.3e-211 737.3 508 68.1
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 8.3e-211 737.3 506 68.4
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.1e-210 736.9 513 68.2
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.1e-210 736.9 508 68.7
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.1e-210 736.9 509 69.5
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.4e-210 735.7 508 68.5
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.4e-210 735.7 520 68.5
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 3.2e-210 735.3 499 69.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 4.1e-210 734.9 517 67.3
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 7.0e-210 734.2 506 68.2
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 7.0e-210 734.2 506 68.2
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.0e-208 730.3 508 68.7
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.0e-208 730.3 505 70.7
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 3.0e-208 728.8 518 67.2
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.5e-207 726.5 459 73.9
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.8e-205 719.5 507 67.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-203 713.0 526 65.4
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.1e-202 710.3 530 64.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.0e-200 703.7 516 67.8
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.7e-200 703.0 515 65.8
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.2e-198 696.8 520 65.0
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.1e-198 696.0 520 64.8
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.1e-197 692.2 442 77.4
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.9e-195 685.6 510 65.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 9.2e-194 680.6 522 64.4
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 3.3e-191 672.2 436 71.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 6.2e-190 667.9 498 65.5
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.6e-183 644.8 360 83.3
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.0e-181 638.6 504 62.1
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 2.7e-177 625.9 522 59.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.0e-176 624.0 520 59.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.7e-176 623.2 510 60.0
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.2e-172 610.5 514 59.5
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.2e-170 602.1 489 59.1
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.6e-158 563.5 416 66.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.7e-118 430.6 407 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 4.5e-116 422.5 427 49.2
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 7.7e-116 421.8 257 75.1
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 6.5e-115 418.7 392 52.3
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.2e-114 416.0 426 49.5
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 4.7e-105 386.0 396 46.2
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.3e-75 287.3 173 76.9
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 2.7e-68 263.8 169 71.6
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 3.2e-53 213.8 120 83.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 3.4e-39 167.2 119 69.7
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 1.6e-33 148.3 285 31.2
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.9e-30 137.5 122 54.1
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.9e-21 108.2 89 52.8
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.2e-15 89.0 56 69.6
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.4e-11 75.5 74 47.3
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.4e-11 75.5 74 47.3
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.4e-11 75.5 74 47.3
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.2e-07 62.4 114 28.9
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 2.0e-07 61.6 58 39.7
Oeu056790.1 Olea europaea HOM05D006476 ORTHO05D292299 1.7e-06 58.5 36 80.6


User provided reference genes

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