Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.1e-170 602.4 335 100.0
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.5e-117 425.6 303 78.9
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.5e-117 425.2 305 79.3
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.3e-116 423.7 315 77.1
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 1.9e-99 366.7 233 81.5
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.3e-95 354.0 257 74.3
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 7.3e-91 338.2 260 72.3
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.3e-83 312.8 303 67.3
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 8.3e-71 271.6 237 60.8
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.4e-62 243.4 274 52.6
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.6e-61 240.7 270 52.2
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 3.3e-59 233.0 265 50.9
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 4.3e-59 232.6 275 51.3
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.7e-55 220.7 267 49.4
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 6.4e-55 218.8 233 54.5
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.4e-54 217.6 256 50.4
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 1.9e-54 217.2 275 47.6
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.4e-54 216.9 273 49.1
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 2.1e-53 213.8 231 51.5
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 2.7e-53 213.4 275 48.0
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.5e-53 213.0 256 52.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 1.3e-52 211.1 265 48.3
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.7e-52 210.7 268 47.4
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 3.9e-52 209.5 255 48.6
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-51 208.0 258 50.0
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.9e-51 207.2 260 49.6
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.5e-51 206.8 273 48.0
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 2.1e-50 203.8 257 49.4
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.1e-50 203.8 257 49.4
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 2.8e-50 203.4 231 48.9
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 3.6e-50 203.0 264 46.2
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 6.2e-50 202.2 274 47.8
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 8.1e-50 201.8 231 50.2
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 3.1e-49 199.9 259 45.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 3.1e-49 199.9 257 49.0
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.3e-49 199.1 258 49.2
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 5.3e-49 199.1 242 49.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.4e-48 196.4 276 47.5
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.3e-47 194.5 262 47.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.7e-47 194.1 258 47.7
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.7e-47 194.1 270 44.4
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.2e-47 193.7 243 48.6
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.2e-47 193.7 337 39.5
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 2.9e-47 193.4 277 48.0
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 6.4e-47 192.2 259 49.8
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.1e-46 191.4 256 46.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.9e-46 190.7 265 46.8
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 7.1e-46 188.7 234 47.9
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 3.5e-45 186.4 267 46.4
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 3.5e-45 186.4 257 46.7
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.0e-44 184.9 275 46.5
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 1.3e-44 184.5 274 45.3
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 3.0e-44 183.3 276 45.7
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 3.9e-44 183.0 274 44.5
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 8.7e-44 181.8 240 43.8
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.5e-43 181.0 268 42.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 4.3e-43 179.5 295 42.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 7.4e-43 178.7 264 43.2
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 2.1e-42 177.2 229 45.4
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 2.1e-42 177.2 235 46.0
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 2.1e-42 177.2 252 44.8
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 4.8e-42 176.0 232 42.7
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 6.2e-42 175.6 232 43.5
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 8.1e-42 175.3 236 43.6
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-41 174.9 242 43.0
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.8e-41 174.1 239 46.4
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.4e-41 173.7 241 43.2
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 3.1e-41 173.3 242 42.6
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 4.0e-41 172.9 236 42.8
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 6.9e-41 172.2 260 48.1
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.5e-40 171.0 236 43.2
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 7.6e-40 168.7 249 46.2
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 9.9e-40 168.3 271 39.9
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 4.9e-39 166.0 239 41.0
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 6.4e-39 165.6 258 44.6
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 7.1e-38 162.2 229 39.7
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.8e-36 157.5 321 36.8
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.1e-35 154.8 265 40.4
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 7.4e-35 152.1 149 52.3
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 2.1e-34 150.6 272 39.3
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.4e-33 147.9 252 38.9
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 4.0e-33 146.4 270 38.9
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 9.0e-33 145.2 257 40.9
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 2.6e-32 143.7 182 49.5
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 3.4e-32 143.3 180 50.6
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 3.8e-31 139.8 270 38.1
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 6.5e-31 139.0 299 36.5
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 9.3e-30 135.2 275 36.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 6.0e-29 132.5 252 41.3
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 1.8e-28 131.0 188 47.3
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 2.3e-28 130.6 187 46.5
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.7e-28 129.0 248 36.3
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 8.2e-26 122.1 229 38.0
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.8e-25 120.9 236 37.7
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 2.4e-25 120.6 184 41.3
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.4e-24 116.7 243 37.4
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 1.0e-23 115.2 202 36.6
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 2.2e-23 114.0 219 36.1
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 2.9e-23 113.6 199 33.7
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.1e-22 111.7 236 35.2
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-22 110.5 223 31.8
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 2.5e-22 110.5 223 31.8
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 5.5e-22 109.4 206 35.4
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-21 107.8 205 36.1
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 2.7e-21 107.1 168 36.9
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 3.6e-21 106.7 156 41.7
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.4e-20 104.8 113 61.1
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.5e-19 101.3 295 32.5
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.9e-19 100.9 232 36.2
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 2.2e-18 97.4 235 36.6
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 3.7e-18 96.7 150 38.7
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 1.1e-17 95.1 270 32.6
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 1.1e-17 95.1 194 29.4
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 1.8e-17 94.4 140 41.4
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 5.3e-17 92.8 158 38.0
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.5e-16 91.3 130 49.2
CAN.G149.33 Capsicum annuum HOM05D001546 ORTHO05D015824 1.0e-15 88.6 71 66.2
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 1.0e-15 88.6 170 41.2
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.9e-15 87.0 108 38.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 6.5e-15 85.9 249 32.9
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.5e-14 82.8 132 43.9
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 9.4e-14 82.0 81 54.3
CAN.G294.19 Capsicum annuum HOM05D003570 ORTHO05D004207 6.1e-13 79.3 260 33.1
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 6.1e-13 79.3 286 30.1
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 6.7e-12 75.9 154 39.6
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 6.7e-12 75.9 219 29.2
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 6.3e-10 69.3 76 42.1
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 2.0e-08 64.3 148 32.4
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.0e-08 64.3 148 32.4
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-08 64.3 111 36.9
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 2.6e-08 63.9 65 61.5
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.9e-07 60.5 161 31.1
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.8e-07 60.1 88 37.5
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 1.1e-06 58.5 55 45.5
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.1e-06 58.5 154 33.8
BolC4t26886H Brassica oleracea HOM05D003570 ORTHO05D004207 4.2e-06 56.6 53 50.9
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 7.2e-06 55.8 116 30.2


User provided reference genes

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