Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.5e-308 1062.0 523 100.0
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 3.8e-211 738.4 546 71.8
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 4.1e-181 638.6 551 61.7
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 9.3e-178 627.5 565 60.9
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 5.7e-175 618.2 575 59.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 2.8e-174 615.9 563 59.9
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.8e-173 613.2 562 60.0
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 6.9e-173 611.3 551 60.4
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.1e-170 604.0 539 59.9
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 2.5e-170 602.8 541 58.8
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 6.1e-169 598.2 552 58.2
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 2.6e-167 592.8 554 57.6
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 5.7e-167 591.7 546 58.1
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 1.3e-166 590.5 480 62.7
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.4e-165 587.0 480 61.9
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 4.1e-165 585.5 505 61.2
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 5.3e-165 585.1 479 63.9
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 6.9e-165 584.7 544 57.2
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 1.2e-164 583.9 477 62.7
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.6e-164 582.8 552 57.2
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 2.6e-164 582.8 546 58.1
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 3.4e-164 582.4 480 61.5
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.3e-163 580.5 512 59.0
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.7e-163 580.1 564 55.9
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.2e-163 579.7 478 61.9
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 2.9e-163 579.3 551 56.4
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.4e-162 577.0 515 60.0
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.9e-162 576.6 479 61.2
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 2.5e-162 576.2 554 57.4
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 7.2e-162 574.7 475 62.1
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.6e-161 573.5 554 55.8
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 4.7e-161 572.0 535 56.4
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 8.0e-161 571.2 486 61.5
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 3.9e-160 568.9 559 56.2
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.7e-158 563.5 436 65.4
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.7e-158 563.5 515 58.3
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 1.7e-158 563.5 543 56.9
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 4.8e-158 562.0 477 62.1
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 6.3e-158 561.6 509 58.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 8.2e-158 561.2 360 78.6
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.1e-157 560.8 480 59.6
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 1.4e-157 560.5 548 55.8
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 5.3e-157 558.5 538 56.7
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 5.3e-157 558.5 547 55.9
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 5.3e-157 558.5 509 57.6
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 2.0e-156 556.6 540 57.2
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.0e-155 554.3 497 57.9
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.0e-155 554.3 534 56.7
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 3.8e-155 552.4 477 59.1
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.8e-155 552.4 541 56.9
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 8.5e-155 551.2 498 58.8
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 8.5e-155 551.2 558 55.4
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.1e-154 550.8 546 56.6
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.5e-154 550.4 546 56.4
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 2.5e-154 549.7 478 60.3
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 3.2e-154 549.3 546 56.4
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.2e-154 548.9 546 56.2
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 1.2e-153 547.4 496 58.9
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.1e-153 546.6 492 59.3
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.6e-153 545.8 543 56.2
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 3.6e-153 545.8 429 64.6
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.8e-152 543.5 555 55.1
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.2e-151 540.8 492 58.7
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 5.7e-151 538.5 482 57.9
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.7e-150 537.0 491 56.8
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 4.8e-150 535.4 497 57.9
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 1.8e-149 533.5 537 53.3
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 7.0e-149 531.6 538 53.9
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 7.0e-149 531.6 484 57.4
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.6e-148 530.4 595 51.9
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.3e-147 527.3 553 53.3
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 1.7e-147 526.9 550 52.7
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 6.5e-147 525.0 538 53.5
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.5e-146 523.9 556 52.9
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 9.4e-146 521.2 539 53.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 3.6e-145 519.2 547 52.3
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 3.0e-144 516.2 549 51.7
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 3.4e-143 512.7 552 51.3
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 7.5e-143 511.5 543 52.1
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 9.8e-143 511.1 485 56.3
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 9.8e-143 511.1 539 52.5
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 9.8e-143 511.1 482 56.2
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 1.7e-139 500.4 519 52.8
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 5.0e-139 498.8 485 54.6
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 1.1e-138 497.7 707 44.6
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.1e-137 493.4 412 60.7
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 5.2e-136 488.8 511 54.2
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 2.6e-135 486.5 479 54.5
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.4e-135 486.1 441 59.0
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 5.7e-135 485.3 482 53.1
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 1.8e-133 480.3 508 51.8
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 4.5e-132 475.7 492 53.7
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.1e-130 471.1 485 52.6
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 3.3e-130 469.5 455 55.4
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 8.0e-129 464.9 517 51.6
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 9.8e-127 458.0 317 77.0
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.7e-123 447.2 424 54.7
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.7e-118 430.6 313 76.0
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 3.2e-117 426.4 313 74.4
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 8.6e-115 418.3 314 73.6
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 3.8e-102 376.3 295 64.4
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 4.6e-92 342.8 192 84.9
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 3.3e-82 310.1 268 59.7
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.2e-79 301.6 183 79.8
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 2.7e-68 263.8 163 77.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.3e-65 255.0 518 33.8
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 4.2e-61 240.0 261 46.4
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 8.8e-51 205.7 235 50.6
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 5.7e-50 203.0 637 28.3
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 2.8e-49 200.7 613 26.9
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 4.7e-44 183.3 496 28.6
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 4.1e-40 170.2 122 72.1
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.3e-34 150.6 151 51.0
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 8.5e-30 136.0 368 28.5
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 4.7e-28 130.2 108 59.3
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.6e-23 115.2 114 48.2
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 1.5e-21 108.6 91 71.4
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 6.1e-20 103.2 74 73.0
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 4.9e-17 93.6 47 83.0
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.7e-15 87.8 58 65.5
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 3.6e-12 77.4 148 32.4
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.8e-11 73.2 78 53.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 3.4e-10 70.9 41 70.7
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 7.5e-10 69.7 93 41.9
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 9.2e-08 62.8 134 31.3
Peaxi162Scf00562g00612 Petunia axillaris HOM05D006344 ORTHO05D007744 2.3e-06 58.2 36 72.2


User provided reference genes

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