Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000227g0320 Nicotiana tabacum HOM05D000071 ORTHO05D000029 2.2e-79 299.3 195 100.0
Nitab4.5_0010781g0010 Nicotiana tabacum HOM05D000071 ORTHO05D000029 4.3e-19 99.0 55 80.0
Nitab4.5_0000227g0310 Nicotiana tabacum HOM05D000071 ORTHO05D000029 9.6e-19 97.8 255 34.1
Nitab4.5_0004261g0030 Nicotiana tabacum HOM05D000071 ORTHO05D000029 9.6e-19 97.8 55 76.4
Nitab4.5_0000023g0450 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.3e-18 97.4 53 83.0
Nitab4.5_0000227g0300 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.3e-18 97.4 54 79.6
Nitab4.5_0002786g0080 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.7e-18 95.9 52 82.7
Nitab4.5_0002914g0150 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.7e-18 95.9 258 32.9
Nitab4.5_0011718g0020 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.7e-18 95.9 71 67.6
Nitab4.5_0002914g0140 Nicotiana tabacum HOM05D000071 ORTHO05D000029 6.2e-18 95.1 56 76.8
Nitab4.5_0013750g0020 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.2e-16 90.9 55 74.5
Nitab4.5_0009002g0020 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.4e-16 89.4 59 69.5
Nitab4.5_0000023g0660 Nicotiana tabacum HOM05D000071 ORTHO05D000029 8.4e-15 84.7 57 66.7
Peaxi162Scf01090g10011 Petunia axillaris HOM05D000071 ORTHO05D000029 7.1e-14 81.6 56 64.3
PGSC0003DMG400019072 Solanum tuberosum HOM05D000071 ORTHO05D000029 1.2e-13 80.9 55 65.5
PGSC0003DMG400014736 Solanum tuberosum HOM05D000071 ORTHO05D000029 2.1e-13 80.1 55 65.5
PGSC0003DMG400014742 Solanum tuberosum HOM05D000071 ORTHO05D000029 4.6e-13 79.0 55 63.6
Peaxi162Scf01090g00004 Petunia axillaris HOM05D000071 ORTHO05D000029 6.0e-13 78.6 56 58.9
PGSC0003DMG400014740 Solanum tuberosum HOM05D000071 ORTHO05D000029 6.0e-13 78.6 55 60.0
PGSC0003DMG400014739 Solanum tuberosum HOM05D000071 ORTHO05D000029 1.3e-12 77.4 52 65.4
PGSC0003DMG400014738 Solanum tuberosum HOM05D000071 ORTHO05D000029 2.3e-12 76.6 55 61.8
PGSC0003DMG400014753 Solanum tuberosum HOM05D000071 ORTHO05D000029 2.3e-12 76.6 55 60.0
Nitab4.5_0004261g0020 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.9e-12 75.9 53 66.0
Nitab4.5_0000023g0530 Nicotiana tabacum HOM05D000071 ORTHO05D000029 4.3e-11 72.4 52 65.4
PGSC0003DMG400006422 Solanum tuberosum HOM05D000071 ORTHO05D000029 1.6e-10 70.5 55 56.4
Peaxi162Scf00199g00052 Petunia axillaris HOM05D000071 ORTHO05D000029 6.9e-09 65.1 57 45.6
arahy.Tifrunner.gnm1.ann1.46MHT5 Arachis hypogaea HOM05D000071 ORTHO05D000029 9.0e-09 64.7 102 37.3
Nitab4.5_0000443g0080 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.2e-08 64.3 58 51.7
Nitab4.5_0006246g0010 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.5e-08 63.9 55 49.1
Phvul.004G114800 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 2.0e-08 63.5 53 49.1
Nitab4.5_0002786g0100 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.4e-08 62.8 43 62.8
CAN.G149.3 Capsicum annuum HOM05D000071 ORTHO05D000029 1.3e-07 60.8 58 48.3
VMungo0464G1728 Vigna mungo HOM05D000071 ORTHO05D000029 1.3e-07 60.8 53 45.3
VMungo0464G1798 Vigna mungo HOM05D000071 ORTHO05D000029 1.3e-07 60.8 51 47.1
FAN10G3717 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.2e-07 60.1 167 27.5
PGSC0003DMG400010447 Solanum tuberosum HOM05D000071 ORTHO05D000029 6.5e-07 58.5 56 44.6
CSS0020490 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.1e-06 57.8 57 42.1
VMungo0464G1503 Vigna mungo HOM05D000071 ORTHO05D000029 1.1e-06 57.8 51 45.1
Dinv07783 Davidia involucrata HOM05D000071 ORTHO05D000029 1.9e-06 57.0 62 41.9
VMungo0464G0826 Vigna mungo HOM05D000071 ORTHO05D000029 1.9e-06 57.0 51 45.1
Atru.chr2.3396 Acer truncatum HOM05D000071 ORTHO05D000029 2.5e-06 56.6 54 46.3
Dinv32122 Davidia involucrata HOM05D000071 ORTHO05D000029 2.5e-06 56.6 56 44.6
Atru.chr2.3395 Acer truncatum HOM05D000071 ORTHO05D000029 4.2e-06 55.8 56 46.4
CSS0031280 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.2e-06 55.8 58 44.8
Duzib151G0557 Durio zibethinus HOM05D000071 ORTHO05D000029 5.5e-06 55.5 58 44.8
CSS0040382 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 7.1e-06 55.1 57 43.9
COL.COLO4_09596 Corchorus olitorius HOM05D000071 ORTHO05D000029 7.1e-06 55.1 56 48.2
Dinv07774 Davidia involucrata HOM05D000071 ORTHO05D000029 7.1e-06 55.1 62 40.3
Migut.N02331 Erythranthe guttata HOM05D000071 ORTHO05D000029 7.1e-06 55.1 52 38.5
Sopen02g017680 Solanum pennellii HOM05D000071 ORTHO05D000029 7.1e-06 55.1 56 41.1
arahy.Tifrunner.gnm1.ann1.M5E8P8 Arachis hypogaea HOM05D000071 ORTHO05D000029 9.3e-06 54.7 53 45.3
COL.COLO4_09603 Corchorus olitorius HOM05D000071 ORTHO05D000029 9.3e-06 54.7 61 39.3
Sed0025272 Sechium edule HOM05D000071 ORTHO05D000029 9.3e-06 54.7 56 46.4


User provided reference genes

Program Settings