Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 0.0e+00 1345.1 696 100.0
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.0e-288 995.0 566 92.0
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 4.5e-220 768.5 739 62.0
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 9.4e-218 760.8 722 62.2
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 2.3e-216 756.1 739 60.9
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 3.1e-213 745.7 739 60.4
Nitab4.5_0002118g0030 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.7e-38 165.2 140 66.4
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 6.2e-28 130.2 769 27.0
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 8.1e-28 129.8 787 26.8
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 6.9e-27 126.7 823 25.2
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 3.5e-23 114.4 799 25.3
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 6.7e-22 110.2 716 25.4
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.3e-20 105.9 173 41.0
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 1.6e-20 105.5 174 40.8
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.6e-20 105.5 698 25.5
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 3.7e-20 104.4 752 26.1
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 8.2e-20 103.2 772 25.1
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.1e-19 102.8 149 44.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.4e-19 102.4 481 26.0
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 9.0e-19 99.8 462 26.0
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.2e-18 99.4 197 37.6
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 1.2e-18 99.4 173 45.1
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.2e-18 99.4 478 26.4
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.7e-17 95.5 796 24.7
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 2.2e-17 95.1 149 43.6
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 2.9e-17 94.7 557 26.2
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-16 92.8 134 44.0
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.4e-16 92.4 172 40.7
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.4e-16 92.4 597 23.8
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.1e-15 88.6 751 24.2
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.1e-15 88.6 751 24.2
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 3.5e-15 87.8 780 24.1
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 4.6e-15 87.4 792 23.0
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 6.1e-15 87.0 534 25.8
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.9e-15 86.7 779 24.4
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 7.9e-15 86.7 167 38.3
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 3.0e-14 84.7 337 27.0
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.5e-13 82.4 794 25.2
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.5e-13 82.4 160 38.8
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 2.5e-13 81.6 256 29.7
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.3e-12 79.3 167 36.5
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.2e-12 78.6 793 24.2
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 6.3e-12 77.0 145 37.9
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 9.0e-11 73.2 405 26.7
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.2e-10 72.8 742 22.8
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.2e-10 72.8 160 34.4
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.5e-10 72.4 517 26.9
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 2.0e-10 72.0 139 38.8
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 5.9e-10 70.5 743 24.2
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 5.0e-09 67.4 746 22.8
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.1e-08 66.2 223 26.9
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 1.4e-08 65.9 768 21.7
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 1.9e-08 65.5 177 31.6
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 2.5e-08 65.1 253 28.1
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 4.2e-08 64.3 160 33.1
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 5.5e-08 63.9 160 31.9
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 5.5e-08 63.9 665 23.6
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 7.2e-08 63.5 233 29.2
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 4.6e-07 60.8 137 37.2
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.8e-06 58.9 75 48.0
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 8.8e-06 56.6 119 32.8


User provided reference genes

Program Settings