Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.8e-119 432.6 212 100.0
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 9.2e-116 420.2 212 96.7
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 3.3e-105 385.2 212 88.2
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 4.4e-102 374.8 212 86.8
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 5.8e-102 374.4 212 86.8
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 8.3e-101 370.5 212 84.4
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 1.9e-81 306.2 212 71.7
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.4e-79 300.1 212 67.9
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 7.6e-78 294.3 212 67.9
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 6.4e-77 291.2 212 67.0
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 6.4e-77 291.2 212 66.5
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 3.2e-76 288.9 212 64.6
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 5.4e-76 288.1 212 67.5
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 2.1e-75 286.2 212 66.5
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 3.5e-75 285.4 212 68.9
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 6.0e-75 284.6 212 65.6
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 7.9e-75 284.3 212 65.6
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.3e-74 283.5 212 65.6
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 1.8e-74 283.1 212 64.6
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 3.0e-74 282.3 212 65.1
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 3.0e-74 282.3 212 65.6
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 8.7e-74 280.8 212 63.7
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.1e-73 280.4 212 65.6
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.1e-73 280.4 212 65.6
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 5.6e-73 278.1 212 64.6
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 7.4e-73 277.7 212 66.0
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 2.8e-72 275.8 212 66.5
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 4.8e-72 275.0 212 62.7
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 2.4e-71 272.7 212 61.3
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 3.1e-71 272.3 212 63.7
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 3.1e-71 272.3 212 64.6
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 5.3e-71 271.6 212 61.3
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 6.9e-71 271.2 212 63.2
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 9.0e-71 270.8 212 61.3
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 9.0e-71 270.8 212 64.6
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 2.6e-70 269.2 212 62.7
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 1.3e-69 266.9 212 63.2
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 2.2e-69 266.2 210 62.9
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 8.4e-69 264.2 212 60.4
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 8.4e-69 264.2 210 62.4
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 8.4e-69 264.2 220 60.0
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 2.5e-68 262.7 212 61.3
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 4.2e-68 261.9 212 61.3
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 7.1e-68 261.2 213 62.4
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 7.1e-68 261.2 212 61.3
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 1.2e-67 260.4 212 59.4
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 7.9e-67 257.7 212 63.7
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.0e-66 257.3 212 59.4
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 1.0e-66 257.3 210 62.4
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 1.8e-66 256.5 212 60.8
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 2.3e-66 256.1 212 59.0
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.9e-66 255.4 212 60.4
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 3.9e-66 255.4 200 62.0
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 1.1e-65 253.8 200 62.0
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 1.5e-65 253.4 212 59.4
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.9e-65 253.1 231 55.4
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.9e-65 253.1 212 58.5
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 3.3e-65 252.3 212 59.9
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 3.7e-64 248.8 212 58.0
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 4.8e-64 248.4 212 59.9
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 8.2e-64 247.7 212 59.0
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 6.9e-63 244.6 212 59.0
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.2e-62 243.8 212 58.0
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 5.8e-62 241.5 212 58.0
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 7.6e-62 241.1 212 58.5
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.3e-61 240.4 212 57.5
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 1.3e-61 240.4 225 57.3
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 3.8e-61 238.8 182 67.6
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 3.8e-61 238.8 201 58.7
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 1.9e-60 236.5 212 56.1
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 1.6e-59 233.4 212 57.1
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 3.5e-59 232.3 212 56.6
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 4.6e-59 231.9 212 56.6
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 1.8e-58 229.9 212 56.1
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 2.3e-58 229.6 212 54.7
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 2.5e-57 226.1 212 55.7
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 4.3e-57 225.3 212 55.7
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 3.7e-56 222.2 212 54.7
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 2.4e-55 219.5 212 51.4
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 2.0e-54 216.5 216 52.8
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 2.0e-54 216.5 211 53.6
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 3.4e-54 215.7 212 53.8
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 3.8e-53 212.2 270 45.6
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 1.4e-52 210.3 236 49.2
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 1.9e-52 209.9 212 51.4
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 2.5e-52 209.5 281 44.1
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 2.2e-48 196.4 246 47.2
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 8.2e-48 194.5 151 60.9
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 3.1e-47 192.6 152 64.5
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 2.6e-46 189.5 197 48.7
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.2e-45 186.4 217 48.8
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 2.9e-45 186.0 150 60.7
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 6.5e-45 184.9 213 47.9
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 2.5e-44 183.0 162 56.2
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 3.2e-44 182.6 213 47.4
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 3.2e-44 182.6 213 47.4
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 5.5e-44 181.8 162 55.6
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 2.1e-43 179.9 212 48.1
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 7.9e-43 177.9 201 46.3
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 4.4e-41 172.2 209 44.5
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 3.7e-40 169.1 209 44.0
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-39 167.5 165 53.9
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-39 167.5 165 53.9
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 1.0e-37 161.0 123 62.6
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 7.2e-36 154.8 154 53.9
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 2.7e-35 152.9 206 43.7
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 4.8e-32 142.1 220 37.7
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.2e-29 133.3 203 38.9
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 3.7e-24 115.9 196 34.2
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.2e-20 102.4 67 68.7
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 3.6e-19 99.4 200 32.0
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 7.7e-14 81.6 300 26.0
Lsat_1_v5_gn_3_107600 Lactuca sativa HOM05D000629 ORTHO05D013393 8.0e-11 71.6 74 50.0
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 2.6e-09 66.6 83 45.8
arahy.Tifrunner.gnm1.ann1.6SNM9F Arachis hypogaea HOM05D005625 ORTHO05D007564 3.4e-09 66.2 97 44.3
arahy.Tifrunner.gnm1.ann1.GWKT0Q Arachis hypogaea HOM05D005625 ORTHO05D007564 2.2e-08 63.5 98 39.8


User provided reference genes

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