Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.4e-66 256.1 127 100.0
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.3e-61 238.8 122 96.7
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.6e-57 225.3 127 85.8
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 3.4e-57 224.9 127 86.6
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 4.4e-57 224.6 127 86.6
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.3e-53 213.0 127 78.0
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 2.3e-53 212.2 127 81.9
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.0e-53 211.8 128 80.5
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 3.9e-53 211.5 127 80.3
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 3.3e-52 208.4 127 75.6
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 3.3e-52 208.4 127 79.5
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.2e-51 206.5 127 78.0
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 1.6e-51 206.1 127 77.2
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.4e-50 202.2 124 78.2
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.4e-50 202.2 124 78.2
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 4.0e-50 201.4 125 79.2
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 9.0e-50 200.3 126 77.0
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.2e-49 199.9 126 77.0
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.2e-49 199.9 124 75.8
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 2.0e-49 199.1 125 76.8
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 3.4e-49 198.4 126 75.4
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 3.4e-49 198.4 127 76.4
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 5.8e-49 197.6 122 77.9
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 9.9e-49 196.8 127 75.6
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.7e-48 196.1 126 75.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.7e-48 196.1 126 75.4
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 2.2e-48 195.7 126 75.4
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 2.2e-48 195.7 128 78.1
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 2.9e-48 195.3 126 75.4
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 2.9e-48 195.3 127 74.0
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 3.8e-48 194.9 125 77.6
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.8e-48 194.9 126 74.6
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.4e-48 194.1 122 77.0
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 6.4e-48 194.1 120 77.5
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 1.4e-47 193.0 127 72.4
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.9e-47 192.6 124 72.6
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 4.2e-47 191.4 127 72.4
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.4e-47 191.0 123 74.0
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 1.6e-46 189.5 127 73.2
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 1.6e-46 189.5 129 73.6
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 2.1e-46 189.1 127 71.7
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 2.1e-46 189.1 126 72.2
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 4.6e-46 188.0 124 71.0
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 72.6
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 71.0
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 7.8e-46 187.2 123 73.2
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 1.7e-45 186.0 124 72.6
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 3.0e-45 185.3 127 73.2
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 3.0e-45 185.3 127 70.9
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 3.9e-45 184.9 128 72.7
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 8.7e-45 183.7 125 68.8
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 8.7e-45 183.7 124 71.0
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 1.1e-44 183.3 120 74.2
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.9e-44 182.6 124 71.0
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 3.3e-44 181.8 127 69.3
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 4.3e-44 181.4 124 70.2
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 9.6e-44 180.3 123 69.9
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.3e-43 179.9 125 68.8
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.3e-43 179.9 125 69.6
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.3e-43 179.9 125 68.8
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.6e-43 179.5 125 68.8
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 1.6e-43 179.5 125 68.8
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 6.2e-43 177.6 122 73.8
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 1.8e-42 176.0 123 68.3
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.4e-42 175.6 127 69.3
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 2.4e-42 175.6 120 66.7
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 6.9e-42 174.1 121 68.6
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.9e-42 174.1 127 64.6
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 9.0e-42 173.7 127 64.6
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 1.2e-41 173.3 126 69.0
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.2e-41 173.3 127 64.6
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 2.0e-41 172.6 123 66.7
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 4.5e-41 171.4 122 69.7
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 5.8e-41 171.0 125 65.6
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 5.8e-41 171.0 103 79.6
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 5.8e-41 171.0 127 66.1
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 9.9e-41 170.2 123 68.3
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.3e-40 169.9 125 64.8
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 2.2e-40 169.1 121 66.9
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 3.8e-40 168.3 127 64.6
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.1e-39 166.8 127 63.0
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 1.4e-39 166.4 130 63.8
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 2.4e-39 165.6 128 64.8
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 3.2e-39 165.2 127 63.8
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 3.2e-39 165.2 125 66.4
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 5.4e-39 164.5 125 65.6
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 9.3e-39 163.7 126 64.3
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 2.1e-38 162.5 129 62.0
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 2.7e-38 162.2 126 65.1
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.5e-38 161.8 126 65.9
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 7.9e-38 160.6 126 64.3
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.0e-37 160.2 125 63.2
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.0e-37 160.2 125 63.2
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 1.0e-37 160.2 122 63.1
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 1.3e-37 159.8 128 62.5
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.3e-37 159.8 125 63.2
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.3e-37 159.8 125 63.2
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.8e-37 159.5 127 63.0
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 3.0e-37 158.7 125 62.4
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 6.7e-37 157.5 126 63.5
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 6.7e-37 157.5 127 65.4
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 8.7e-37 157.1 126 61.9
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 1.5e-36 156.4 128 60.2
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.5e-36 156.4 127 59.8
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 1.9e-36 156.0 126 62.7
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 5.6e-36 154.5 124 62.1
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 1.3e-35 153.3 125 61.6
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 1.3e-35 153.3 125 61.6
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 6.2e-35 151.0 124 61.3
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 6.2e-35 151.0 124 60.5
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 2.4e-34 149.1 126 61.9
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.2e-33 146.7 127 57.5
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 1.2e-33 146.7 127 62.2
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 7.1e-31 137.5 127 59.8
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 1.1e-28 130.2 127 58.3
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 2.5e-28 129.0 127 52.8
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 9.6e-28 127.1 80 73.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.3e-27 126.7 97 64.9
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 1.8e-26 122.9 97 63.9
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.9e-23 112.8 77 67.5
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 3.2e-23 112.1 81 65.4
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 1.5e-20 103.2 67 73.1
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 4.1e-18 95.1 120 46.7
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 5.9e-17 91.3 124 48.4
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 2.9e-16 89.0 131 42.0
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.8e-16 88.6 66 60.6
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 5.0e-16 88.2 72 61.1
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 7.2e-15 84.3 76 56.6
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 1.0e-13 80.5 70 55.7
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 2.3e-13 79.3 127 34.6
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 3.0e-13 79.0 125 38.4
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 8.8e-13 77.4 115 40.9
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 9.7e-12 73.9 111 35.1
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 6.3e-11 71.2 49 73.5
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 4.1e-10 68.6 127 34.6
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 6.9e-10 67.8 99 41.4
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 1.5e-09 66.6 126 33.3
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 1.0e-08 63.9 62 45.2
PRCOL_00003291 Prasinoderma coloniale HOM05D005465 ORTHO05D006612 3.6e-06 55.5 68 47.1
Sopen02g033680 Solanum pennellii HOM05D005465 ORTHO05D006612 3.6e-06 55.5 36 75.0


User provided reference genes

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