Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000211g0070 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.7e-47 192.2 91 100.0
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.1e-17 93.2 52 82.7
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 1.4e-17 92.8 52 82.7
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 3.2e-17 91.7 52 80.8
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 6.7e-15 84.0 46 82.6
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.9e-14 82.4 52 69.2
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 5.7e-14 80.9 52 69.2
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 5.7e-14 80.9 52 69.2
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 6.3e-13 77.4 52 63.5
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 63.5
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 1.4e-12 76.3 52 61.5
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 1.8e-12 75.9 61 54.1
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 3.1e-12 75.1 52 61.5
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 3.1e-12 75.1 52 61.5
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 3.1e-12 75.1 52 61.5
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 3.1e-12 75.1 52 61.5
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 3.1e-12 75.1 52 63.5
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 4.1e-12 74.7 52 59.6
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 4.1e-12 74.7 52 61.5
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 5.3e-12 74.3 52 61.5
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 6.9e-12 73.9 52 61.5
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 6.9e-12 73.9 52 59.6
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 6.9e-12 73.9 52 59.6
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 6.9e-12 73.9 52 59.6
Haze_02953 Corylus avellana HOM05D003429 ORTHO05D003873 9.1e-12 73.6 48 64.6
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 9.1e-12 73.6 61 52.5
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 9.1e-12 73.6 52 57.7
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 1.2e-11 73.2 52 59.6
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 1.5e-11 72.8 52 59.6
QL04p022451 Quercus lobata HOM05D003429 ORTHO05D003873 1.5e-11 72.8 52 57.7
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 1.5e-11 72.8 52 59.6
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 1.5e-11 72.8 52 57.7
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 2.0e-11 72.4 52 59.6
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 2.0e-11 72.4 43 69.8
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 2.0e-11 72.4 52 59.6
Nn1g02902 Nelumbo nucifera HOM05D003429 ORTHO05D003873 2.0e-11 72.4 52 59.6
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 2.6e-11 72.0 52 57.7
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 2.6e-11 72.0 52 59.6
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 2.6e-11 72.0 52 59.6
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 2.6e-11 72.0 52 59.6
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 55.8
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
AUR62018434 Chenopodium quinoa HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 59.6
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 3.4e-11 71.6 52 57.7
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 4.5e-11 71.2 52 57.7
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 4.5e-11 71.2 52 57.7
Manes.04G056744 Manihot esculenta HOM05D003429 ORTHO05D003873 4.5e-11 71.2 43 67.4
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 4.5e-11 71.2 72 45.8
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 5.9e-11 70.9 52 55.8
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 5.9e-11 70.9 52 55.8
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 5.9e-11 70.9 52 55.8
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 5.9e-11 70.9 52 55.8
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 7.7e-11 70.5 52 57.7
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 7.7e-11 70.5 52 59.6
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 55.8
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 59.6
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 1.0e-10 70.1 60 51.7
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 57.7
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 57.7
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 55.8
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 1.0e-10 70.1 52 57.7
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 55.8
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 55.8
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 55.8
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 55.8
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 55.8
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 57.7
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 53.8
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 53.8
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 1.3e-10 69.7 52 57.7
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.3e-10 69.7 51 58.8
CDE07G0955 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 1.7e-10 69.3 43 65.1
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 2.2e-10 68.9 52 55.8
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 2.2e-10 68.9 52 55.8
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.2e-10 68.9 60 55.0
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 2.2e-10 68.9 52 51.9
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 2.9e-10 68.6 52 53.8
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 2.9e-10 68.6 52 59.6
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 3.8e-10 68.2 52 53.8
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 3.8e-10 68.2 52 55.8
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 5.0e-10 67.8 52 53.8
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 5.0e-10 67.8 52 51.9
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 5.0e-10 67.8 52 53.8
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 6.5e-10 67.4 52 55.8
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 6.5e-10 67.4 52 55.8
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 6.5e-10 67.4 43 60.5
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 6.5e-10 67.4 52 53.8
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 8.5e-10 67.0 51 56.9
AUR62020999 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.1e-09 66.6 52 53.8
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 1.1e-09 66.6 52 53.8
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 1.4e-09 66.2 52 55.8
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 1.4e-09 66.2 52 50.0
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 1.4e-09 66.2 52 53.8
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 1.4e-09 66.2 52 53.8
HPP92_028715 Vanilla planifolia HOM05D003429 ORTHO05D003873 1.4e-09 66.2 52 53.8
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 1.9e-09 65.9 78 43.6
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 1.9e-09 65.9 52 53.8
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 1.9e-09 65.9 60 51.7
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 2.5e-09 65.5 52 51.9
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 2.5e-09 65.5 52 51.9
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 2.5e-09 65.5 52 55.8
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 3.2e-09 65.1 52 51.9
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 4.2e-09 64.7 52 51.9
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 4.2e-09 64.7 52 57.7
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 7.2e-09 63.9 52 50.0
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 9.4e-09 63.5 51 52.9
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.2e-08 63.2 52 53.8
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 3.6e-08 61.6 51 52.9
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 6.1e-08 60.8 52 50.0
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.0e-07 60.1 52 46.2
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 1.4e-07 59.7 52 48.1
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 5.1e-07 57.8 52 48.1
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 6.7e-07 57.4 41 58.5
Ca_14866_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.1e-06 56.6 52 46.2
Ca_29535_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.1e-06 56.6 52 46.2
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 2.6e-06 55.5 41 56.1
Lsat_1_v5_gn_8_67461 Lactuca sativa HOM05D003429 ORTHO05D003873 3.3e-06 55.1 53 47.2
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 5.7e-06 54.3 40 55.0
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 9.7e-06 53.5 41 51.2


User provided reference genes

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